Transcript Information: R_Transcript_8274.p1


Annotated TAIR IDAT5G19390.1
Annotated Gene NameRho GTPase activation protein (RhoGAP) with PH domain
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:6531906-6538206 | Forward length=870
E-Value9.5E-252
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.055756029302
Replicate 28.4209761027933
Replicate 39.7384258764391
Condition 2: 8 Hour
Replicate 112.210197360057
Replicate 212.555575365372
Replicate 314.14757886589
Condition 3: 24 Hour
Replicate 115.284743314701
Replicate 210.467402280956
Replicate 311.792439824625


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_8274.p1 GENE.R_Transcript_8274~~R_Transcript_8274.p1 ORF type:complete len:748 (+),score=172.55,RhoGAP|PF00620.23|1.1e-31,Lzipper-MIP1|PF14389.2|1.1e+04,Lzipper-MIP1|PF14389.2|1e+04,Lzipper-MIP1|PF14389.2|1.7e-20,PH|PF00169.25|1.2e-13 R_Transcript_8274:308-2551(+)
ATGTCGGCTTCATTGGCGGCATTTGAACGTCCCAGACTCGGTCCTTCCAATACGGTTTTTAAGAGTGGACCTCTTTTCATCTCTTCCAAAGGATTGGGTTGGAAATCTTGGAAGAAGCGTTGGTTCATTCTTACACGGACTTCTTTAGTGTTCTTCAAAAATGATCCAAGTGCCCTTCCTCAAAGAGGCGGAGAAGTAAATTTGACGTTAGGTGGGATTGACTTAAATAATTCAGGAAGCGTTGTTGTCCGAGAGGATAAAAAGCTGTTAACAGTACTTTTTCCTGATGGACGTGATGGCCGAGCATTTACGCTTAAGGCTGAGACATCAGAGGATTTATACGAATGGAAGACAGCCCTGGAGCAGGCCCTTGCACAGGCACCTAGTGCTGCCCTTGTGATGGGTCATAACGGGATATTTAGGAATGACACAAATGATGCTATCGATGGATCTTTCAATCAATGGAGGGATAAGCGTCCTGTAAAATCATTGGTGGTTGGACGTCCAATTTTGCTGGCATTGGAAGATATAGACGGTGGACCGTCGTTTCTGGAGAAAGCTCTTAGATTTCTTGAGACTTATGGAACCAAAGTGGAAGGAATTTTGCGTCAGTCTGCTGATGTTGAAGAGGTGGAGCGGAGAGTCCAAGATTATGAACAAGGCAAAAATGAATTCGATCCAGATGAGGATGCTCATGTTGTTGGTGACTGTGTGAAGCATGTCCTCCGTGAGCTCCCTTCTTCTCCGGTTCCAGCATCTTGCTGTACTGCATTGCTGGATGCTTACAAAATTGACCGTAAGGAAGCTCGGATTAATGCTATGCGATCGGCAATATTGGAAACATTTCCGGAACCAAACCGGCGATTATTGCAAAGAATTTTGAAGATGATGCATACAATTGCTTCTCATTCTTCTGATAATCGGATGAGTCCATCTGCGGTTGCTGCTTGCATGGCACCTTTACTGTTGCGCCCTCTTTTAGCTGGTGAATGTGAGCTCGATGATGACTTTGAAATGAATGGTGATAATTCAGCCCAGCTTCTGGCTGCTGCAAATGCTGCCAATAATGCTCAAGCTATTATTACAACTCTTCTGGAGGAATACGAGAATATTTTTGACGATGATAATTTGCAGAGATGCTCAATTTCTGCTGACTCGCGGATTGAGAACAGTGGGAGTGATGATTCCACAGATGATGAAAACCTAGATATCAAAGCAAATGGATGTCATGAGGCTGGTAATGAAGCAGAACAAACAGATGATGATCAGGAACGAGTGTTGAGTGGTAAACTGAGTGAAAGTAGCGGTTATGCTGGCAGTGACCTTTACGACTATAAGCCGCGGAAGACACCATCAATGGAATCAGTTGATTCTTCGGGAGAGGAAGAACTTGCTATCCAGAGGCTTGAAATTACGAAAAATGACTTGCGGCACCGTATTGCAAAGGAGGCACGGGGAAATGCAATATTACAAGCTAGCTTGGAGAGAAGGAAACAGGCTTTGCATGAGCGTCGCTTAGCCCTTGAACAAGATGTTCAAAGACTGCAAGAGCAGTTGCAAGCTGAAAGAGATCTTAGAGCTGCATTGGAGGTTGGTCTAAGCATGTCCTCGGGCCAATTCTCTAGTTCACGTGGTATGGATTCCAAGACAAGGGCGGAGCTTGAGGAGATTGCTCTTGCTGAGGCAGACGTAGCCAGATTGAAGCAGAAGGTGGCTGAACTGCACCATCAACTCAATCAGCAACGACTGCATCAATTTGGTCCGCTATCAGATGCATGCGAACGGAGATTTCTCCAGCAAGACTTTGATAGTACTCTTGCCTTTGTTAATCATGAAAGGAAGCAAAGAAGCGAGGAGAGTTTACTGGGGCCTGAATGGAATCATATCAAAGGACAAATCTTAGATACTGGAAGCAGCAGTAGGCAACCTCGCAAGCAATTTATGGAGTCTACTAGTTTGAGTGATTCTAAAAACACTGATGCATCGGCTAGCGTGTCCTTGGATGAGTTTGTTGCTGTAGATTCTGCCTCAATGCCATCCACTTCTCGGGTAGCAGAGGTGCTGGATTTTCCAAGACATCCATCCGCAGCATCATCCACATTAGTGGAGTTAACAACCCGGCTCGACTTTTTCAAGGAGCGGCGATCTCAACTGATGGAGCAGCTGCACCACCTTGATCTGAATTATGGGGTGGCAACTTCGCAGGATTATTTGTACAGACCATCGTCACCTTCGTGGAGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_8274.p1 GENE.R_Transcript_8274~~R_Transcript_8274.p1 ORF type:complete len:748 (+),score=172.55,RhoGAP|PF00620.23|1.1e-31,Lzipper-MIP1|PF14389.2|1.1e+04,Lzipper-MIP1|PF14389.2|1e+04,Lzipper-MIP1|PF14389.2|1.7e-20,PH|PF00169.25|1.2e-13 R_Transcript_8274:308-2551(+)
MSASLAAFERPRLGPSNTVFKSGPLFISSKGLGWKSWKKRWFILTRTSLVFFKNDPSALPQRGGEVNLTLGGIDLNNSGSVVVREDKKLLTVLFPDGRDGRAFTLKAETSEDLYEWKTALEQALAQAPSAALVMGHNGIFRNDTNDAIDGSFNQWRDKRPVKSLVVGRPILLALEDIDGGPSFLEKALRFLETYGTKVEGILRQSADVEEVERRVQDYEQGKNEFDPDEDAHVVGDCVKHVLRELPSSPVPASCCTALLDAYKIDRKEARINAMRSAILETFPEPNRRLLQRILKMMHTIASHSSDNRMSPSAVAACMAPLLLRPLLAGECELDDDFEMNGDNSAQLLAAANAANNAQAIITTLLEEYENIFDDDNLQRCSISADSRIENSGSDDSTDDENLDIKANGCHEAGNEAEQTDDDQERVLSGKLSESSGYAGSDLYDYKPRKTPSMESVDSSGEEELAIQRLEITKNDLRHRIAKEARGNAILQASLERRKQALHERRLALEQDVQRLQEQLQAERDLRAALEVGLSMSSGQFSSSRGMDSKTRAELEEIALAEADVARLKQKVAELHHQLNQQRLHQFGPLSDACERRFLQQDFDSTLAFVNHERKQRSEESLLGPEWNHIKGQILDTGSSSRQPRKQFMESTSLSDSKNTDASASVSLDEFVAVDSASMPSTSRVAEVLDFPRHPSAASSTLVELTTRLDFFKERRSQLMEQLHHLDLNYGVATSQDYLYRPSSPSWS*

Click here to download the sequence:
Link to NCBI Protein BLAST