Transcript Information: R_Transcript_82792.p1


Annotated TAIR IDAT1G67750.1
Annotated Gene NamePectate lyase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:25401660-25403165 | Forward length=408
E-Value1.2E-227
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.567654175296
Replicate 23.2377472604572
Replicate 34.5492352702639
Condition 2: 8 Hour
Replicate 19.611274091442
Replicate 210.553500308223
Replicate 319.381509470834
Condition 3: 24 Hour
Replicate 116.413759373078
Replicate 211.491408253735
Replicate 312.580316245273


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_82792.p1 GENE.R_Transcript_82792~~R_Transcript_82792.p1 ORF type:5prime_partial len:428 (+),score=66.41,Pec_lyase_C|PF00544.15|6.9e-21 R_Transcript_82792:1-1284(+)
GTCCTACCTCAAGGCCAAAAAACCAAACTTTTGCCTCCGTTACAATTTAGCACTCCGCAAACAGCATACCAAAAAATGCATCTGTTATTTCTTTTGTTGGTGACTGCCTTGTCTTTTCTACCCTTGATCCAATCATCACCTGTTCAGGACCCCGAGCTAGTAGTTCAAGAAGTTCAAGAGGCAATTAGTAATGTGTCAAGAAGGAATTTGGCTGGTCTGAACAACTGTAGGACGGGGAATCCCATTGATGATTGCTGGATGTGTGACCCTGACTGGCAAAAAGACCGCAAACGCTTAGCTTCTTGTGCAATTGGTTTTGGTAAGAATGCTATAGGTGGTAAAAATGGCAAATACTACAAGGTTACAGATCCTAGGGATGATGCTGTGAACCCGAAACCAGGCACATTGAGATATGGTGTCATTCAGGAAGAACCCTTATGGATAGTTTTCGACCGAGATATGGTGATCAAGCTCAAACAAGAGTTACTTATGAATTCATTCAAGACCATTGATGGCAGAGGAGTTAATGTGCACATTGCTGGTGGACCATGCATCACCATGCAATATGTGAGCAACATCATCATACATGGTATCCACATACATGATTGCAAGCGAGGTGGGAATGCCTATGTCAGGGCCTCACCTACTCATTATGGCTATAGAACCATTTCAGATGGTGATGGCATTTCTATCTTCACTTCTAGCCATATATGGGTGGATCATTGCTCTCTTTCCAAGTGTACTGATGGCTTGATCGACGCCATTCATGGCTCCACTGCTATTACCATATCTAACAACTACTTTAGCCAACATAACAAGGTTATGCTGTTAGGAGCTCATGATAGTAACAGAGAAGACAAGAACATGCAAGTCACTATTGCCTTCAACCATTTTGGGGATGGTCTTGTTCAAAGGATGCCAAGGTGTAGACATGGATATTTCCATGTGGTGAATAACGACTACACCCGTTGGCAAATGTATGCCATAGGAGGAAGTGCAGCACCAACTATCAACAGCCAAGGCAACAGATTCCTTGCTTCTAATGACCGCTTCACTAAAGAGGTAACCAAACGTGACAATGCTCCAGAAAGTGTGTGGAAGAAATGGAATTGGAGATCACAGGGGGATTTGTTTCTAAATGGAGCCCTTTTTGTTACATCTGGGAGTGGATCATCCTCAACTTATGCAAAGGCTTCAAGCTTAAGTGCTCGACCATCTTCATATGTGGCTTCTGTGACTAGGAAAGCAGGTGTGCTTAACTGCAGGAGAGGCAGAGGCTGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_82792.p1 GENE.R_Transcript_82792~~R_Transcript_82792.p1 ORF type:5prime_partial len:428 (+),score=66.41,Pec_lyase_C|PF00544.15|6.9e-21 R_Transcript_82792:1-1284(+)
VLPQGQKTKLLPPLQFSTPQTAYQKMHLLFLLLVTALSFLPLIQSSPVQDPELVVQEVQEAISNVSRRNLAGLNNCRTGNPIDDCWMCDPDWQKDRKRLASCAIGFGKNAIGGKNGKYYKVTDPRDDAVNPKPGTLRYGVIQEEPLWIVFDRDMVIKLKQELLMNSFKTIDGRGVNVHIAGGPCITMQYVSNIIIHGIHIHDCKRGGNAYVRASPTHYGYRTISDGDGISIFTSSHIWVDHCSLSKCTDGLIDAIHGSTAITISNNYFSQHNKVMLLGAHDSNREDKNMQVTIAFNHFGDGLVQRMPRCRHGYFHVVNNDYTRWQMYAIGGSAAPTINSQGNRFLASNDRFTKEVTKRDNAPESVWKKWNWRSQGDLFLNGALFVTSGSGSSSTYAKASSLSARPSSYVASVTRKAGVLNCRRGRGC*

Click here to download the sequence:
Link to NCBI Protein BLAST