Transcript Information: R_Transcript_82852.p1


Annotated TAIR IDAT2G30780.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:13116547-13118059 | Forward length=452
E-Value3.8E-146
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.1078573407473
Replicate 24.4672979609145
Replicate 35.0953091364749
Condition 2: 8 Hour
Replicate 16.8200474901418
Replicate 26.1416735424533
Replicate 38.8475935712524
Condition 3: 24 Hour
Replicate 19.5472505879234
Replicate 27.3375329384513
Replicate 39.229244916332


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_82852.p1 GENE.R_Transcript_82852~~R_Transcript_82852.p1 ORF type:complete len:517 (+),score=74.15,PPR_2|PF13041.2|1e+02,PPR_2|PF13041.2|3.3e-10,PPR_2|PF13041.2|2e-09,PPR_2|PF13041.2|6.3,PPR_2|PF13041.2|59,PPR_2|PF13041.2|7.4e+03,PPR_2|PF13041.2|0.076,PPR|PF01535.16|3.5e+02,PPR|PF01535.16|5.8e-05,PPR|PF01535.16|0.19,PPR|PF01535.16|0.029,PPR|PF01535.16|0.0051,PPR|PF01535.16|41,PPR|PF01535.16|44,PPR|PF01535.16|6.5,PPR_3|PF13812.2|3e+03,PPR_3|PF13812.2|0.23,PPR_3|PF13812.2|4.7e+02,PPR_3|PF13812.2|6.5,PPR_3|PF13812.2|22,PPR_3|PF13812.2|6.5e+02,PPR_3|PF13812.2|1e+04,PPR_3|PF13812.2|5.5e+03,PPR_3|PF13812.2|6.7,PPR_3|PF13812.2|1.8e+02,PPR_1|PF12854.3|9.4e+02,PPR_1|PF12854.3|1e+02,PPR_1|PF12854.3|0.0016,PPR_1|PF12854.3|0.67,PPR_1|PF12854.3|26,PPR_1|PF12854.3|6.1e+02,PPR_1|PF12854.3|2.4e+03 R_Transcript_82852:115-1665(+)
ATGAGACGAGCTTGGACTTTGAGGATCTCATCAGACCTTCAAAGGGCAGCAGAGCTTTTAATCCAAACAAGAAGAACGAAAACCTCCTCTAGTCTTGCCAAACTCAAAACCCTTAAACCCTCTTATTTCCCAAAACCCACTGTCCCTCTCAGATTTGCACCCTTTTCATCTTCCTTGAATACCCCTTATAATTACCTTCTTGGGTTGTTTGAAAAATCCTATTATTTTGACCCACAAATCAAACAGGAACTTACCCTCAAGGTTTCTGGTCTCAAAGATGAGTTGCTTAAGTTTAAAGGTGATTCTCAGGGTGTCTTTAATGTCTTAGATGAAAAGGGTTTCCCTTTGTTTTCTACTTACGAAGATGGGTCTGCTTTTACTGAGCTCTTGGACCAGCTCTCTAGTTTCCCTTCTTTAGCCATTGAGGTTATCAACTGGAGGAGAAAACGTGCTGGCATTAGCTTCCCTATTCAAGCTGAGGAGTATTCAAAGGGAATTTCAACTGCTGGCAGGGCTAAGAAGGTTGAACTTGCATATGAGTTGTTCACAGAGGCTGCTAACAATCATGTGAAGACGTCACAAATTTACAACGCGTTAATGGGTGCTTATATGAGCAATGGCCTGTCCGAGAAATGTCAGTCACTGTTTCGGGAATTAAAGAAAGAAAGCAAATGTAGACCTACGATCGTCACCTACAACATTCTTATATCTGTCTTCGGTCGTTTAATGTTGGTTGACCATATGGAAGCAACACTCCAGCAGATTTATGGTGCTAATCTCTCCCCTACTGTAAACACATTCAATAATTTGATTGCTGGATATGTAACAGCCTGGATGTGGGATCGCATGGAGAACACCTATAAGACGATGAAAGAAAGGCTCGTGAAGCCTAATACTACCACTTACATGTTAATGGTCAGAGGCTATTCCCATTGTGGTCAGCTGGAGAAGATGGAAGCAATGTATGAGCTGATTAAAGAAAGTGCAGACAAGAATAATGTAAACGTAATCACATGCATGATATGTGCATATTGTAAGAGTTCGAGTGGAAATAGAATTAAAAAGATCGGCAAACTGTTGAAGAAGATACCAGAGGAGCAATATTCTTCTGGGTTGAACGTGTTACTTATTAAGGTTTATGCACAAGAACGACTTCTTGATAAAATGGAAAAGTATATTGATGTTGCTTTTGAGCATCATACCACTATGAGGACTTTGGGCATCATGCGTTCGATAATTACAACTTATTATAGATGTAATGCGGTTGACAAGCTCGCTTGCTTTGTGAAACGTGCGGAGGATGCAGGATGGGGAATTGGCAGGTCCCTTTATCACTGTAAAATGGTTATGTATGGATCACAAAACCGGCTGGAGGAAATGGAAAACGTACTGACTGAAATGGAGAAATTCAATATAAGTGTAACAAAGAAAACATTTGTTATTCTGTACAAAGCTTACTCACTTTGGGGTCCCAGATGTAAACTTGAGCAAGTAGTTGGCATGATGTGCAAGCATGGACATGGAATTCTTTTGGATGGTTGCCCTTCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_82852.p1 GENE.R_Transcript_82852~~R_Transcript_82852.p1 ORF type:complete len:517 (+),score=74.15,PPR_2|PF13041.2|1e+02,PPR_2|PF13041.2|3.3e-10,PPR_2|PF13041.2|2e-09,PPR_2|PF13041.2|6.3,PPR_2|PF13041.2|59,PPR_2|PF13041.2|7.4e+03,PPR_2|PF13041.2|0.076,PPR|PF01535.16|3.5e+02,PPR|PF01535.16|5.8e-05,PPR|PF01535.16|0.19,PPR|PF01535.16|0.029,PPR|PF01535.16|0.0051,PPR|PF01535.16|41,PPR|PF01535.16|44,PPR|PF01535.16|6.5,PPR_3|PF13812.2|3e+03,PPR_3|PF13812.2|0.23,PPR_3|PF13812.2|4.7e+02,PPR_3|PF13812.2|6.5,PPR_3|PF13812.2|22,PPR_3|PF13812.2|6.5e+02,PPR_3|PF13812.2|1e+04,PPR_3|PF13812.2|5.5e+03,PPR_3|PF13812.2|6.7,PPR_3|PF13812.2|1.8e+02,PPR_1|PF12854.3|9.4e+02,PPR_1|PF12854.3|1e+02,PPR_1|PF12854.3|0.0016,PPR_1|PF12854.3|0.67,PPR_1|PF12854.3|26,PPR_1|PF12854.3|6.1e+02,PPR_1|PF12854.3|2.4e+03 R_Transcript_82852:115-1665(+)
MRRAWTLRISSDLQRAAELLIQTRRTKTSSSLAKLKTLKPSYFPKPTVPLRFAPFSSSLNTPYNYLLGLFEKSYYFDPQIKQELTLKVSGLKDELLKFKGDSQGVFNVLDEKGFPLFSTYEDGSAFTELLDQLSSFPSLAIEVINWRRKRAGISFPIQAEEYSKGISTAGRAKKVELAYELFTEAANNHVKTSQIYNALMGAYMSNGLSEKCQSLFRELKKESKCRPTIVTYNILISVFGRLMLVDHMEATLQQIYGANLSPTVNTFNNLIAGYVTAWMWDRMENTYKTMKERLVKPNTTTYMLMVRGYSHCGQLEKMEAMYELIKESADKNNVNVITCMICAYCKSSSGNRIKKIGKLLKKIPEEQYSSGLNVLLIKVYAQERLLDKMEKYIDVAFEHHTTMRTLGIMRSIITTYYRCNAVDKLACFVKRAEDAGWGIGRSLYHCKMVMYGSQNRLEEMENVLTEMEKFNISVTKKTFVILYKAYSLWGPRCKLEQVVGMMCKHGHGILLDGCPS*

Click here to download the sequence:
Link to NCBI Protein BLAST