Transcript Information: R_Transcript_82978.p1


Annotated TAIR IDAT4G29090.1
Annotated Gene NameRibonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:14333528-14335255 | Forward length=575
E-Value6E-23
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.62832912064436
Replicate 20.10841463209792
Replicate 30.11827919584932
Condition 2: 8 Hour
Replicate 10.12643303759335
Replicate 20.19243443925289
Replicate 30.37490417804586
Condition 3: 24 Hour
Replicate 10.15805719261758
Replicate 20.41756944543262
Replicate 30.33905222406553


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_82978.p1 GENE.R_Transcript_82978~~R_Transcript_82978.p1 ORF type:complete len:581 (+),score=57.44,RVT_1|PF00078.23|1.9e-17,zf-RVT|PF13966.2|2e-15 R_Transcript_82978:174-1916(+)
ATGAGTTGTGTCACTTCAACTTCCTGTTCCATCATTGTCAACGGAGGTCTCACTAATTGGTTCAACCCTTCTAGAGGAATTAGGCAAGGAGACCCCCTCTCCCCCTACTTGTTTATTATTTGTATGAATATGCTTTCTCACATGATCACTGATAGCTGTTATAACAACTCTTGGAACCCCTTTCTTATTGGCAAGTCAAAGATACCCATTTCGCACCTAATGTTTGCTGATGACTTGATTCTCTTTGGGGAGGCTAGTATAGAAACTTTTCTTATTGTTCAGCACACCTTGGAAAATTTTTGTGCAATGTCTGGGCAAAATATAAACCATAATAAAAGCAAGATCTTTTTCTCTCCTAACACTTCTCCTCATTTGATCACTGAAGGAGAAAAAATTCTGAATGTGGATGCTAGTTCTGATTTGGGGCTATATTTAGGCTTCCCTCTCACCCCTAACCGACCCAAATTGTCTCAAGTCAAATACATTGTTAACAAAGTCAAGGGAAAATTAGCAACCTGGAAGAGTCATTGCCTCTCTAGGGCTGGAAAAATTTGCCTAATAAACTCCACTCTCAATGCAATCCCAAACTACTACATGCATCATATCCACCTTCCTTGTGCTACTTTAGACAAACTTGATTCTATTGTCATTAACTTTCTATGGGGGGATTCTGAGGAAAAAAAGAGGTTGCATTTGGTGGATAAAGAGAGGATCTTTCTTCCAAAAGAGAGGGGTGGACTAGGAATCCGGAGTAACAAAACCATGAACTCGGTATACATGGCAAAAAGGAACTGGCAACTAATGAATGATAAGGAAAATTTGGCTCACAAAGTACTTAAAAGCAAGTATATCTTCAACAGACCCCATGGTGCAGTTGACTTTAACAAAGGGTCCTTTATCTGGAAAGACCTTGAAAGGGGTTGGGAGTTATTTCAAGCTAACATCCTTTGGATGGTAGGCAAGGGAGATCACATCTCCCTTTGGAATGATAATTGGAGCAGACTTGGGACTCTTCGATCGTTGATCTCTGGACCCCTAAGTCACTCTGAGACTGACCTCCTGGTCAGTGACTGTATTAGTCATTGCCAATGGGATTTCTCCAAGCTTTCCTTTTCCTTTCCCCCTGACTTACTCCATTCCTTGTTGGCTGTCCCAATTTCTCCTTCCGGTTCTGACTTTCCCTGTTCCTTGTTGGCTGAAAATGATAAATTTAATGCAAAAAATGCTTACAGTGATCTTTATTTAATAGGGATTGATGATGGTGATTGTTCTTGGATTTGGAAAATTCCTACTTTACCAAAAATCATGTTTTTCATTTGGACGGTGTGGCATGACCGGATTCCTCATAATGTTTTATTGTCTACTAGGAATTTGTTACCTTCCAATGTTTGCCATCTTTGTAATTTGAAAGCTGAAAATGCCTTGCATCTTTTAAGGGATTGCCGACTAAGAAAAAATGTTTGGAACTTTGATTGTGTATATGATGGTTTTTTCCAAAGTAATTTAAAGGACTGGCTTTTGCTTAACCTCACATCCAAACACTCTGTCAACAACCTTCCTTGGCCTACTCTTTTTGCCTCCATTATTTGGGTTCTTTGGAATTACAGAAACTTGTACGTATTTGAACATGTTCCCTTCCCTTCCCCTTCTACGATTAAGCATGCAGCCAACCAAAAAGCATGGGAATCTTGGAGCCTTCGAGATAACCCCCCTCTAATTCCATCAAAACTTTCATCATGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_82978.p1 GENE.R_Transcript_82978~~R_Transcript_82978.p1 ORF type:complete len:581 (+),score=57.44,RVT_1|PF00078.23|1.9e-17,zf-RVT|PF13966.2|2e-15 R_Transcript_82978:174-1916(+)
MSCVTSTSCSIIVNGGLTNWFNPSRGIRQGDPLSPYLFIICMNMLSHMITDSCYNNSWNPFLIGKSKIPISHLMFADDLILFGEASIETFLIVQHTLENFCAMSGQNINHNKSKIFFSPNTSPHLITEGEKILNVDASSDLGLYLGFPLTPNRPKLSQVKYIVNKVKGKLATWKSHCLSRAGKICLINSTLNAIPNYYMHHIHLPCATLDKLDSIVINFLWGDSEEKKRLHLVDKERIFLPKERGGLGIRSNKTMNSVYMAKRNWQLMNDKENLAHKVLKSKYIFNRPHGAVDFNKGSFIWKDLERGWELFQANILWMVGKGDHISLWNDNWSRLGTLRSLISGPLSHSETDLLVSDCISHCQWDFSKLSFSFPPDLLHSLLAVPISPSGSDFPCSLLAENDKFNAKNAYSDLYLIGIDDGDCSWIWKIPTLPKIMFFIWTVWHDRIPHNVLLSTRNLLPSNVCHLCNLKAENALHLLRDCRLRKNVWNFDCVYDGFFQSNLKDWLLLNLTSKHSVNNLPWPTLFASIIWVLWNYRNLYVFEHVPFPSPSTIKHAANQKAWESWSLRDNPPLIPSKLSSC*

Click here to download the sequence:
Link to NCBI Protein BLAST