Transcript Information: R_Transcript_83263.p2


Annotated TAIR IDAT1G08620.1
Annotated Gene NameTranscription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein
Annotated Gene Symbol(s)PKDM7D
Annotation TypeHomolog
Chromosome Positionchr1:2737554-2743370 | Forward length=1209
E-Value4E-35
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4410232332673
Replicate 21.1050684429631
Replicate 31.2056177682186
Condition 2: 8 Hour
Replicate 11.5464756808786
Replicate 21.2945773697528
Replicate 31.5285566838221
Condition 3: 24 Hour
Replicate 11.6916279009887
Replicate 21.1608030995041
Replicate 31.9583735772487


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_83263.p2 GENE.R_Transcript_83263~~R_Transcript_83263.p2 ORF type:3prime_partial len:190 (+),score=32.11,zf-C5HC2|PF02928.12|2.9e-13 R_Transcript_83263:2390-2956(+)
ATGATGTGGAAAGAAGCCTCTGGAAAGGATGGTATATTAGCAAAGTCTCTGAGGACCAGGATTAGGTCAGAGTCGAGATGCAGGGAATATTTGTTGTCTGCAAACAAGTCAAGAAAGATGGACAAGTCATTTGATGGGGTTGACCAGAAAAGGGAATGTGTCACATGTTATTATGATCTATTTTTATCTGCAGTGAGCTGTCCATGTAGCCCGGATAAGTTTTCATGTCTCAAGCATGCGAAGCATCTCTGTTGCCCCTGGAATGTCAAAGTTTTTCTGTTCCGCTACCTGATTAGTGAGTTAAATATCCTTTTAGAAGCCGTGGAAGGCAAGTTGAGTGCCATCCGGAGTTGGATGAAAGGTGGTCTTGGGATTGCCCTCTATTGGGATAAGCACAATGAAGACCAACATGTGCCTTCTGTAGCACCTTCCATAGCTAAAGCATCCAATGGCAGAGCTACTTCCGTAGCTGAAGCATCCAATGGCAGAGCTACTTCTGTAGCTGAAGCATCCAATGGCAGAGCTACGCTATCAAAAGAAGAGGTTTCTGGCTCAAAATTACTTCCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_83263.p2 GENE.R_Transcript_83263~~R_Transcript_83263.p2 ORF type:3prime_partial len:190 (+),score=32.11,zf-C5HC2|PF02928.12|2.9e-13 R_Transcript_83263:2390-2956(+)
MMWKEASGKDGILAKSLRTRIRSESRCREYLLSANKSRKMDKSFDGVDQKRECVTCYYDLFLSAVSCPCSPDKFSCLKHAKHLCCPWNVKVFLFRYLISELNILLEAVEGKLSAIRSWMKGGLGIALYWDKHNEDQHVPSVAPSIAKASNGRATSVAEASNGRATSVAEASNGRATLSKEEVSGSKLLP

Click here to download the sequence:
Link to NCBI Protein BLAST