Transcript Information: R_Transcript_83269.p1


Annotated TAIR IDAT1G08620.1
Annotated Gene NameTranscription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein
Annotated Gene Symbol(s)PKDM7D
Annotation TypeHomolog
Chromosome Positionchr1:2737554-2743370 | Forward length=1209
E-Value5E-157
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.7395439299128
Replicate 20.90185451452555
Replicate 31.9370798235672
Condition 2: 8 Hour
Replicate 11.8734151704604
Replicate 21.5907741444065
Replicate 32.3877286453663
Condition 3: 24 Hour
Replicate 12.2803727984565
Replicate 21.9538887070847
Replicate 32.1447012646221


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_83269.p1 GENE.R_Transcript_83269~~R_Transcript_83269.p1 ORF type:3prime_partial len:745 (+),score=133.02,JmjC|PF02373.18|3.6e-23,zf-C5HC2|PF02928.12|1.4e+04,zf-C5HC2|PF02928.12|1.6e-13,JmjN|PF02375.13|4.4e-13 R_Transcript_83269:163-2394(+)
ATGGATACTGAAAACACCAAATTAAACCCTATCAAGAAACATCAGCAAGAGAAACTATCAGCACCTCCTGGTTTCGGTTCACTTACATCATTTACATTGAAAAGAGTTGAAGAAGATCCTTCAATGCCGACAACCTCAAATGAGTTAGAAGGAACTTCTATTATCGAGAAAAGTTTGAAGCTCGAACGTAGACCTTGGATTCTTCACGACGATCAGTTTCAAAATGAAGTGATTTCGGAATCGAATCACCGTGATATGAACTTTTCAACAAAAGCTTCCCTTCCAAAGGGCGTCATTCGGGGATGTCCAGAATGCAGTGATTGCCAAAAGGTTTTAGGTAGGTGGAATCCTGGTGGCGCATGCATTTATACACTTGAAGAGGCACCTGTTTTTCATCCTAGTGAAGAGGAGTTCAAGGATACCTTCAAATACATTGAAAGCATACGTCTGCAAGTGCAGCCTTATGGGTTCTGTCGTATTGTCCCTCCACCTGCATGGCAATTGCCATGCTTTCTCGAGGAAGGTGACATTTGGCATAGTTCCAAATTTGCTACCCAACTACAACAAGTTAATGAACTCCAGATTCCCTGGTTGTGTGGACAGTCATCTGCAGCCCTTGACACAAGGGAAAGCAAACGAAGACGATTGGTGTATGATGTTGGTAATGGTTATGCTTCAAACTTCGTCTCTGGTGAATGCCATGAGGCTTGGAGCAGCCAATCTCTATCTGGTCCTCAGTTCACTCTCATAGCTTTCAAAAGATATGCTGATTATTTTCAGCAGTGCTACTTTTCCAGAGATACAAATGCTAGTCCAGTGGTGCCCCCAGAACCAACTGAACAGATTATTGAAGGCGAATATTGGCGGATTATTGAAAAACCAACTGAAGAAATAGAAGTGCTTCATGGTACTGATCTAGAGTGTAGGAGTTTTGGCAGTGGATTATTGGCGTCATCTAGTACAGAATCGTCCTCTGATGTTGACGAAAATTTCACTGGCTGGAACCTGAATTGTATCTCCAGGTTGCCTGGTTCTTTGCTTTCCTTTGAGACATCAGATTCTTCTGGTATCATTGCACCTCAACTGCATATTGGAATGTGTTTTTCCTCGATTCCGTGGACTGGTCAAGAGCATCATTTGTATAAACTGTATTATCTGAACCTGGGTGCTCCCCGAATATGGTATGGAACATCTAAATGTGATCCCTATAAATTTGAGGCAATTATGAAGAAGCCGTTTGCTGATTCTTCAGAAGAACATCTTGAGCAGCGTCATAAACTGGGAAGGCAGGTATGCCCTGCAACATTGAAATCAGAGGATGTACAAGCTTATCGTTGCATTCAGCACCCCAGAGAATTTGTTCTTTTTCTTCCTGGAGCATATCACTCAGGTTTTGATTGCGGCTTCAATTGTTCTGTGTCAGCGGTGTTTGCTCCCTTGAACTGGTTACCTTATGGGCTGAACTCCATAGAACTTTATCGTGAGCGAAGGATGAAGACAGTTATCTCTTATGATAAGGTGCTACTGAGAGTAGCTGATGAAGTTGTTAAGTCACAATGGGAATGCCTGGTGAAGGGGAAGAAAACAAAAAAAATTATGATGTGGAAAGAAGCCTCTGGAAAGGATGGTATATTAGCAAAGTCTCTGAGGACCAGGATTAGGTCAGAGTCGAGATGCAGGGAATATTTGTTGTCTGCAAACAAGTCAAGAAAGATGGACAAGTCATTTGATGGGGTTGACCAGAAAAGGGAATGTGTCACATGTTATTATGATCTATTTTTATCTGCAGTGAGCTGTCCATGTAGCCCGGATAAGTTTTCATGTCTCAAGCATGCGAAGCATCTCTGTTCTTGCCCCTGGAATGTCAAAGTTTTTCTGTTCCGCTACCTGATTAGTGAGTTAAATATCCTTTTAGAAGCCGTGGAAGGCAAGTTGAGTGCCATCAGGAATTGGATGAAAGGTGGTCTTGGGGTTGCCCTCTATTGGGATAAGCACAATGAAGACCAACATGTGCCCTCTGTACCACCTTCCGTAGCTGAAGCATCCAATGGCAGAGCTACTTCCGTAGCTGAAGCATCCAATGGCAGAGCTACTTCCGTAGCTGAAGCATCCAATGGCAGAGCTACTTCCGTAGCTGAAGCATCCAATGGCAGAGCTACTTCTGTAGCTGAAGCATCCAATGGCAGAGCTACGCTATCAAAAGAAGAGGTTTCTGGCTCAAAATTACTTCCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_83269.p1 GENE.R_Transcript_83269~~R_Transcript_83269.p1 ORF type:3prime_partial len:745 (+),score=133.02,JmjC|PF02373.18|3.6e-23,zf-C5HC2|PF02928.12|1.4e+04,zf-C5HC2|PF02928.12|1.6e-13,JmjN|PF02375.13|4.4e-13 R_Transcript_83269:163-2394(+)
MDTENTKLNPIKKHQQEKLSAPPGFGSLTSFTLKRVEEDPSMPTTSNELEGTSIIEKSLKLERRPWILHDDQFQNEVISESNHRDMNFSTKASLPKGVIRGCPECSDCQKVLGRWNPGGACIYTLEEAPVFHPSEEEFKDTFKYIESIRLQVQPYGFCRIVPPPAWQLPCFLEEGDIWHSSKFATQLQQVNELQIPWLCGQSSAALDTRESKRRRLVYDVGNGYASNFVSGECHEAWSSQSLSGPQFTLIAFKRYADYFQQCYFSRDTNASPVVPPEPTEQIIEGEYWRIIEKPTEEIEVLHGTDLECRSFGSGLLASSSTESSSDVDENFTGWNLNCISRLPGSLLSFETSDSSGIIAPQLHIGMCFSSIPWTGQEHHLYKLYYLNLGAPRIWYGTSKCDPYKFEAIMKKPFADSSEEHLEQRHKLGRQVCPATLKSEDVQAYRCIQHPREFVLFLPGAYHSGFDCGFNCSVSAVFAPLNWLPYGLNSIELYRERRMKTVISYDKVLLRVADEVVKSQWECLVKGKKTKKIMMWKEASGKDGILAKSLRTRIRSESRCREYLLSANKSRKMDKSFDGVDQKRECVTCYYDLFLSAVSCPCSPDKFSCLKHAKHLCSCPWNVKVFLFRYLISELNILLEAVEGKLSAIRNWMKGGLGVALYWDKHNEDQHVPSVPPSVAEASNGRATSVAEASNGRATSVAEASNGRATSVAEASNGRATSVAEASNGRATLSKEEVSGSKLLP

Click here to download the sequence:
Link to NCBI Protein BLAST