Transcript Information: R_Transcript_83340.p1


Annotated TAIR IDAT5G23080.1
Annotated Gene NameSWAP (Suppressor-of-White-APricot)/surp domain-containing protein
Annotated Gene Symbol(s)TGH
Annotation TypeOrtholog
Chromosome Positionchr5:7743226-7748889 | Reverse length=930
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.89901311727
Replicate 26.7722931405387
Replicate 39.5643998313789
Condition 2: 8 Hour
Replicate 18.4345881342285
Replicate 29.5932384516986
Replicate 312.694758993381
Condition 3: 24 Hour
Replicate 111.478903613852
Replicate 29.5772314180377
Replicate 310.738226725305


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_83340.p1 GENE.R_Transcript_83340~~R_Transcript_83340.p1 ORF type:complete len:958 (+),score=266.05,DUF1604|PF07713.9|1.4e-34,DUF1604|PF07713.9|1.1e+04,DUF1604|PF07713.9|1.6e+04,Surp|PF01805.16|5.5e-09 R_Transcript_83340:237-3110(+)
ATGGATTCCGACGAAGAAGATTTTGTGTTCGTCGGAACACCGATAGAAAGAGAAGAAGAACTCACCAGTCGTAAAAAGAAAGCCCTCGCCGAATCTTCTTCTCATCTCCGAACCCTTCCTTCTTGGAAACAAGAGGTTAGGGATGAAGAAGGAAGGAGAAGATTTCATGGAGCATTTACAGGAGGATTTTCTGCTGGTTATTACAATACAGTGGGATCCAAGGAGGGTTGGGCCCCAAAGACATTCTCATCATCACGGAAGAACAGAACTGAAGTTAGACAGCAAAGTGTTTTGGACTTCTTGGATGAAGATGAAAAAGCAGAAATGGAAGGTCACCTATTGGGGACGTCATCACAGTTTGATACCTTTGGATTTACAGCTACAGAGATTGCCCGCCAACAAGCTGAGAAAGAGCAGAAGCACAGGCCATCAGCCATTCCTGGTCCTGTCCCTGATGAACTAGTTGTTCCTGCTACTGAATCTGTTGGTGTGAAGTTGTTATCAAAAATGGGATGGCGGCATGGTCGATCTATAAAAGACTCACGTGCTAACTCACTTCATGAGGTTCGTAGAGAGGCTAGGAAGGCATTTTTAGCTCTTTCTTCCAATGATAAATCAGCAAGTAGCAGTGGCTCTGGGACCATGAAGGATGGCCTTGATGACCTTATTGAGGAGCCGGCTACTGACCATGTTGAGTTTTCCCAGTGCACACCGGTATATGTGCGGCAACCTAAACAAGACTTGTATGGTCTAGGGTATGATCCATACAAGCATGCTCCGGAATTCAGGGAGATGAAAAGATCACACTTGTTAGAGCATAGAGAGGTTGGCTTCAGAAAACCTTTCTTCTCAACACTAGAACCTTCCAAGTCAAGAAGGATTGCTCCTGGCTTTGGCATTGGAGCATTGGAAGAGCTTGATGTTGAGGATGAGGATATCTATGCCTCTGGATATAACTATGCAGAGACATATGTTCCGGACGATGAAGAGACTTCAAGACTGCTGCTGGAGGATGCTGAAAAGTCAAGTGGCAAAGATTTGGGTTTTATTCCTAGATTCAAAGTTGCATCTAATTCTGAATATCAGTTGGAAAGATTCGATCCTCCAAACATTCCTAATGATTTCATTGCGCGGCACAAGTTTCTTATGCCCATTGATACTATTAACCTGATCAGTGTTCACTCCCCACCAGAGGTCCCACCTCCTGAGGATAATAATCTTAAAATCATGATTGAGGGAGTTGCAGCTTTGGTGGCTCGTTGTGGTAAATTATTTGAGGACATCTCAAGAGAGAAGAATAAGTCAAATCCACTATTTAATTTTCTCAATGGTGGAATTGGTCATGGCTATTATGCAAGAAAGTTGTGGGAGGAGCAACAAAAGCGTAATGATCACATTAAATGGCGACCAGATGAAAAATTATACTCTACTGTGCAGAAAATGACAGCAGAGAGTCGTGGCAAAATCTTAGGGGAAAAACCTTTGGAAAGAACCTTGAAGGATTCTAGTTCTTCCTTAGCCGCCGGAGATGTCCAACATCAATCTAATCTTTCAGATACGTTCACCAAACCTGAATCATTTAGGGAGCTCCTTGAAGCTGCAAAACCTTTCAAAGATGATCCAGGAAAGCAAGAAAGATTTGAGCAGTTCCTGAAGGACAAATATCAAGGAGGACTCCGCTCTACCGATTCAGGGAAAGCAAATAACTTGTCAGAAGCTTCCCGTGCCCGTGAGAGATTAGATTTTGAGGCTGCTGCTGAGGCAATTGAAAAAACAAAGTTGGCCAACCAGACCAAACACTCGGCACAGCAGCTAATGGAATTCACTATGGCTACGGGGCTGCAGTTCACTTCTGGTGGAGTTGAGCATGGGAAGGCCGGTTCTGGAGAACCATTGACATCTAGGAAAGTATATCCAAAGCGTGAAGAGTTCCAGTGGCGACCTGCACCTTTACTGTGCAAGCGTTTCAACATCAGCGATCCTTTCATGGGAAAGCCACCGCCTGCTCCAAGGATGAGAAGCAAGTTGGATTCTCTCATTTTCACACCAGATTCTGCAAAAATGAAGAAGACAGAGGAATCAATTTTGTCCATTGATCACTCAGTCATTCCTTTGAAAAATAATGAAGATATGGCCATGGAAATGAACAGCAGGCAACCTGAAGTTGCTGTAGAAGTTGAAAATGTTGAGCGGCCAGTTGACCTTTACAAGGCCGTTTTCTCTGATGACTCTGATGACGAAGTAGAGGAATCCGGTATTAGTCAAATGGAAGATCCACAAAAGAAGACTGAAGCTGCTAGTGCAGCCTTTAGCCGCATAGTAGCTGGTGACTTCTTGGAGTCTTTGGGCAAGGAACTTGGCTTAGAGGTTCCTCCTGATTTGCCTTTGCCAGCTAATAAAGCTGGGACCTCAGTGTCACCTAAAGATGGTACCGAAGATACTGGTGGTACTAATGTCATGCCAAAGGATATGCCGTCATCTGCTTCATTGTACAATGATGGAGTTTCTGCAACCCGTGAGGTTGAGAAGAGCAAAGGATTTGAGCAGGCTGTTGATAATGAGGCCAGAACAGTAGAAAAACCACCTAAAATTGAAAACATAACTGGGACCTCTGGCTTGCAAAAAGTTCTTAGCAATGTTAATGTCGATAGAAAGGATCGAGGGGATAGGAAGGACAGATATGACAACAGCAGTTCATCATCAGAAGATGAACGGAAACGAAAACGCCATAGGAGACACCATCATAGACGCAGTAGTTCAGATGATGATTCCTCTGATGATTCTAGAGATCGACATCGCTCTAGGTCGAGAGACAACAAGCGAAGGTCTTCTCGGAAGAAGCATCGAAGGAGAAGGCACTCAAAGTACAAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_83340.p1 GENE.R_Transcript_83340~~R_Transcript_83340.p1 ORF type:complete len:958 (+),score=266.05,DUF1604|PF07713.9|1.4e-34,DUF1604|PF07713.9|1.1e+04,DUF1604|PF07713.9|1.6e+04,Surp|PF01805.16|5.5e-09 R_Transcript_83340:237-3110(+)
MDSDEEDFVFVGTPIEREEELTSRKKKALAESSSHLRTLPSWKQEVRDEEGRRRFHGAFTGGFSAGYYNTVGSKEGWAPKTFSSSRKNRTEVRQQSVLDFLDEDEKAEMEGHLLGTSSQFDTFGFTATEIARQQAEKEQKHRPSAIPGPVPDELVVPATESVGVKLLSKMGWRHGRSIKDSRANSLHEVRREARKAFLALSSNDKSASSSGSGTMKDGLDDLIEEPATDHVEFSQCTPVYVRQPKQDLYGLGYDPYKHAPEFREMKRSHLLEHREVGFRKPFFSTLEPSKSRRIAPGFGIGALEELDVEDEDIYASGYNYAETYVPDDEETSRLLLEDAEKSSGKDLGFIPRFKVASNSEYQLERFDPPNIPNDFIARHKFLMPIDTINLISVHSPPEVPPPEDNNLKIMIEGVAALVARCGKLFEDISREKNKSNPLFNFLNGGIGHGYYARKLWEEQQKRNDHIKWRPDEKLYSTVQKMTAESRGKILGEKPLERTLKDSSSSLAAGDVQHQSNLSDTFTKPESFRELLEAAKPFKDDPGKQERFEQFLKDKYQGGLRSTDSGKANNLSEASRARERLDFEAAAEAIEKTKLANQTKHSAQQLMEFTMATGLQFTSGGVEHGKAGSGEPLTSRKVYPKREEFQWRPAPLLCKRFNISDPFMGKPPPAPRMRSKLDSLIFTPDSAKMKKTEESILSIDHSVIPLKNNEDMAMEMNSRQPEVAVEVENVERPVDLYKAVFSDDSDDEVEESGISQMEDPQKKTEAASAAFSRIVAGDFLESLGKELGLEVPPDLPLPANKAGTSVSPKDGTEDTGGTNVMPKDMPSSASLYNDGVSATREVEKSKGFEQAVDNEARTVEKPPKIENITGTSGLQKVLSNVNVDRKDRGDRKDRYDNSSSSSEDERKRKRHRRHHHRRSSSDDDSSDDSRDRHRSRSRDNKRRSSRKKHRRRRHSKYK*

Click here to download the sequence:
Link to NCBI Protein BLAST