Transcript Information: R_Transcript_83497.p1


Annotated TAIR IDAT1G30010.1
Annotated Gene NameIntron maturase, type II family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:10513194-10515329 | Forward length=711
E-Value1.6e-320
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.5966555333073
Replicate 21.2006252678776
Replicate 32.236362108411
Condition 2: 8 Hour
Replicate 12.6295838227864
Replicate 21.6528964261964
Replicate 33.3417191100294
Condition 3: 24 Hour
Replicate 13.3300027220101
Replicate 22.4608378120588
Replicate 33.2663659714059


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_83497.p1 GENE.R_Transcript_83497~~R_Transcript_83497.p1 ORF type:5prime_partial len:717 (+),score=129.67,RVT_1|PF00078.23|0.0078,RVT_1|PF00078.23|0.079 R_Transcript_83497:3-2153(+)
AGGGGCCGTTCGCCCGTCTCTCCGTCTGATTCAACTCCACCGGGGAAGCCTGAAGGCTACAGATTGAGGCCGGCGAAACTCAATAGCCTCACTTCCAGGAGCATGTCTTTGAGGACTTTCATCAAACACCTTCCATGCAATTTTCTTCTCTTAGCCCGCTACTCATCTCTTCACTCTCTTTCTTCTCTATCACCCCAACAACCAAACCCCCAACACCAAGACCAAGATCCATACACCTTAATGAAACAAGACCCAATTCAAATATGCTCAGAAATCTGGTTAAAATCCTTCTCAACCCCAAAGTCAAAGCCTTTCTCTAACCTCACTGGTTTCTTATCCAAATTTGACATCTGGGTCTTAGCCTACCAACGCTCTGTTGCTCATTTCACTGGTTCTTTCCCTTCAAGTAATGCCATATCTTTGCAAGCCCTTCAAGACCTTCTTTCTCTTAGAAATGCTGTTGTTAAGGGCCATTTCAAGTGGAACATGAAGGAGAATCCTTTCATTAGAAGCCGAACTGAGAAAAAACCCATCTCAAACAGGAAGTTTCAGAAGTTTCTAGAATCAGATGTTCAGCCTTTCCAAGACCATGTTGTGCAAGAGGTATTGCTTATGATTCTTGAACCCATTTTTGAGTCTAAGTTTTCATCAAAGTCTCATGCTTTTAGGCCTGGTAGAAATGCTCATACTGTGATTAGGACTATTAGGAGTAACTTTGCTGGGTTTGTTTGGTTTATGAGGGGAGATTTTAGTGGGGTTTTGGAAAATGTGGATAAAAATTTGGTGATGGGTTGTTTGGAAAATGTGGTTAAGGATAAGAGAGTTTTGGGTTTGATTGATTTAGCTCTAAGAAAAAAGCCTACTAATGTTGGGTGGAAATGTTGTGGTGATGAGAAAAAAGGAAAAAAGGTCGGTGGGAAAAGTAGGAGGAAGTTTTTGAAGCCGAATGAGCCAAAACCCGACCCTTATTGGCTTAGAACGTTCTTTGATTTTGCTCCTGATGAGGCTGCAAAGGTGCCATGTTATGGATATTGTGGGATTCTTAGCCCTTTATTAGCTAATGTGTGTTTGAATGAATTGGATTGCATGATGGAAGAGAAGATAAACAAGTTTTTTAGGTCGAGTACTTCGGTTAATGATGGTTGTCATAACCCTTCTTGGCCTGAGTTTGTTCCTTCTAGTAGTGGGAAGGATGAAACAAAAAAGATGGATTACATTAGGTATGGTGGGCATGTCTTGGTAGGCGTTCGAGGATCTAGGGAGGATGTAGTGGAGCTTAAGGAGGAGTTGATAAGCTTTTGTGGGAGCAAACTAGGGATAACATTAGAGAGTTCGAAGATTGAGATTGAACATGTAAGCAGGGGAATTCAGTTTCTGGATCATGTTATTTGTCGTCGCGTGATATACCCTACACTGCATTACACAGGGACAGGTGGTAAAATTATCAGCAGGAAAGGTGTAGGAACTTTGCTTTCAGTTACAGCCAGCTTACCACAATGTATTCGTCGATTTAGGCATCTTGAATTGCTTAAAGGTGATAAGGATCCTGAGCCCTTGCCTTGTACTCCGATGCTTTATTCAAGTCAAGCTCATACAAATGCTCAGATGAATAAGTTCCTTGAGACCATGGCTGATTGGTATAGATATGCAGACAACCGTAAGAAAATTGTTGGGTTTTGTGCTTATGTGATCCGTAGCTCTCTGGCAAAGTTGTATGCTGCAAGGTATAAGCTTAAATCTCGTGCCAAGGTGTACAGTATGGCATCTCGTGATCTCAGTTATCCTCTTAGAGAGAGGAGACACAACATGGCATCGGAGTATTCAGATCTCTTGAGGCTCGGTCTTGTTGATGTCATTGAAGGTGTTCAGTTTTCCCGTATGTCTTTGATTCCAAGTTGTGATTATACCCCATTTCCCCGGGCTTGGGTCCCTGAGCATGAACAAGTTTTGCTTGAATATGTCAAATTGCAAGACCCCAAATTATTTTCTGAATTGCTTACTTCGGTCAAAACAGAAGGGTTAACTCTTCCGCAAGATGAAATTTCGGAAACTGTGTGGGATTTTAAGATCCTTGGCATTTGGCAATTCGACACTGAATCAAGAAGGGATCTCAATGGCATGGATGGGGTACTGACATCAGGATCAATTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_83497.p1 GENE.R_Transcript_83497~~R_Transcript_83497.p1 ORF type:5prime_partial len:717 (+),score=129.67,RVT_1|PF00078.23|0.0078,RVT_1|PF00078.23|0.079 R_Transcript_83497:3-2153(+)
RGRSPVSPSDSTPPGKPEGYRLRPAKLNSLTSRSMSLRTFIKHLPCNFLLLARYSSLHSLSSLSPQQPNPQHQDQDPYTLMKQDPIQICSEIWLKSFSTPKSKPFSNLTGFLSKFDIWVLAYQRSVAHFTGSFPSSNAISLQALQDLLSLRNAVVKGHFKWNMKENPFIRSRTEKKPISNRKFQKFLESDVQPFQDHVVQEVLLMILEPIFESKFSSKSHAFRPGRNAHTVIRTIRSNFAGFVWFMRGDFSGVLENVDKNLVMGCLENVVKDKRVLGLIDLALRKKPTNVGWKCCGDEKKGKKVGGKSRRKFLKPNEPKPDPYWLRTFFDFAPDEAAKVPCYGYCGILSPLLANVCLNELDCMMEEKINKFFRSSTSVNDGCHNPSWPEFVPSSSGKDETKKMDYIRYGGHVLVGVRGSREDVVELKEELISFCGSKLGITLESSKIEIEHVSRGIQFLDHVICRRVIYPTLHYTGTGGKIISRKGVGTLLSVTASLPQCIRRFRHLELLKGDKDPEPLPCTPMLYSSQAHTNAQMNKFLETMADWYRYADNRKKIVGFCAYVIRSSLAKLYAARYKLKSRAKVYSMASRDLSYPLRERRHNMASEYSDLLRLGLVDVIEGVQFSRMSLIPSCDYTPFPRAWVPEHEQVLLEYVKLQDPKLFSELLTSVKTEGLTLPQDEISETVWDFKILGIWQFDTESRRDLNGMDGVLTSGSI*

Click here to download the sequence:
Link to NCBI Protein BLAST