Transcript Information: R_Transcript_83538.p1


Annotated TAIR IDAT4G14190.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:8183594-8185180 | Reverse length=501
E-Value5.2E-122
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.4234195071324
Replicate 22.0469930767979
Replicate 32.1056332609277
Condition 2: 8 Hour
Replicate 12.2507898140922
Replicate 22.5537497367371
Replicate 32.4269562946478
Condition 3: 24 Hour
Replicate 12.8137702451782
Replicate 22.7031515074802
Replicate 34.2677975712613


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_83538.p1 GENE.R_Transcript_83538~~R_Transcript_83538.p1 ORF type:complete len:359 (+),score=66.24,PPR_2|PF13041.2|3.1e+02,PPR_2|PF13041.2|1.2e-11,PPR_2|PF13041.2|5.5e-05,PPR_2|PF13041.2|3.4e+02,PPR_2|PF13041.2|0.058,PPR_2|PF13041.2|7.9e+03,PPR_1|PF12854.3|0.00021,PPR_1|PF12854.3|1.8,PPR_1|PF12854.3|0.016,PPR_1|PF12854.3|9.8,PPR|PF01535.16|5.6e+02,PPR|PF01535.16|1.5e-07,PPR|PF01535.16|0.025,PPR|PF01535.16|0.7,PPR|PF01535.16|4.6,PPR|PF01535.16|1.2e+04,PPR_3|PF13812.2|1.3e+04,PPR_3|PF13812.2|0.17,PPR_3|PF13812.2|0.19,PPR_3|PF13812.2|1.1e+03,PPR_3|PF13812.2|57,PPR_3|PF13812.2|9.6,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|1.3e+04 R_Transcript_83538:844-1920(+)
ATGGATGAAGCCACGTCAAAACTTCAAGATATGAAGAGTTATGGTTTAGAACTTAGTTCAGATGTCTTCAATTCTATAATCCATTGTTATGCTCAGAAAGGCAAGTTTGATGAGGCTCTTTGTTACCTTAATGAGATGAAGGAAATGAATTTGAGCCCAGATACCGAAACCTATGATGGGTTGATTAAAGCTTATGGGAAGTTCCAAATGTATGATGAGATGATCAACTGTTTAAAGATGATGGAATGTGGTGGATGTGCGCCTGATCACATTACGTATAACCTATTGATCTGTGAACTCTCAAAGGGGGGTTTGCTGAGCAGAATGGAGAGGATGTACCAAACTCTTCTTTCGAAGAAAATGAATCTTCAATCATCTGCTTTGGTTACAATGATTGAGGCGTATGCCAACTTTGGGGTGTGGGAGAAGATGGAAGAGTTTTATATGAAAGTTGCAAACTCAAGGACCTTCCTCAAGGAAGGACTGATAAGGAAGATTGCTAGAGTTTACATTGAAAATCACATGTTCTCCAAGTTAATTGATTTGGGGAATGATGTTGCTCAAAAAAATGGTAGGACTAACCTCTTTTGGCGACTACGCCTCCTTTCTTGTGCCTGTCTTCTGAATAAGAAGGGCATGAATTCTGTCATACAAGAGATGGAGGAAGTCAAGGTTTTATGGAATGTAACTATTGCTAACATTGTCTCACTGGCTTACCTGAATATGAAAGACTTTAAGCAGTTAAGTCTGGTATTCTCAGAACTGGCAAATAGACATGTCAAGCCTGATATTGTCACTTTTGGGATCTTATATGATGCACATAATGTTGGCTTTGATTGGAGGAGCACATTAAAGACATGGAGGAAACATGGTTATCTTGAGAATGGTGTGGAAATGAATACTGATCCTTTGGTTTTCACTGCATTCGAAAAAGGACTTTTTCTTAGAACTATAGAGGAAATGTACTCTTTACTTGAGCCTAAAACCAGAAAGGAGAAAAGATGGACTTATGATAGCCTACTTGATCTAGTCTTAAAGCACCATGGAAATTTGCCTTTTCCAGATGGAAATGCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_83538.p1 GENE.R_Transcript_83538~~R_Transcript_83538.p1 ORF type:complete len:359 (+),score=66.24,PPR_2|PF13041.2|3.1e+02,PPR_2|PF13041.2|1.2e-11,PPR_2|PF13041.2|5.5e-05,PPR_2|PF13041.2|3.4e+02,PPR_2|PF13041.2|0.058,PPR_2|PF13041.2|7.9e+03,PPR_1|PF12854.3|0.00021,PPR_1|PF12854.3|1.8,PPR_1|PF12854.3|0.016,PPR_1|PF12854.3|9.8,PPR|PF01535.16|5.6e+02,PPR|PF01535.16|1.5e-07,PPR|PF01535.16|0.025,PPR|PF01535.16|0.7,PPR|PF01535.16|4.6,PPR|PF01535.16|1.2e+04,PPR_3|PF13812.2|1.3e+04,PPR_3|PF13812.2|0.17,PPR_3|PF13812.2|0.19,PPR_3|PF13812.2|1.1e+03,PPR_3|PF13812.2|57,PPR_3|PF13812.2|9.6,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|1.3e+04 R_Transcript_83538:844-1920(+)
MDEATSKLQDMKSYGLELSSDVFNSIIHCYAQKGKFDEALCYLNEMKEMNLSPDTETYDGLIKAYGKFQMYDEMINCLKMMECGGCAPDHITYNLLICELSKGGLLSRMERMYQTLLSKKMNLQSSALVTMIEAYANFGVWEKMEEFYMKVANSRTFLKEGLIRKIARVYIENHMFSKLIDLGNDVAQKNGRTNLFWRLRLLSCACLLNKKGMNSVIQEMEEVKVLWNVTIANIVSLAYLNMKDFKQLSLVFSELANRHVKPDIVTFGILYDAHNVGFDWRSTLKTWRKHGYLENGVEMNTDPLVFTAFEKGLFLRTIEEMYSLLEPKTRKEKRWTYDSLLDLVLKHHGNLPFPDGNA*

Click here to download the sequence:
Link to NCBI Protein BLAST