Transcript Information: R_Transcript_8375.p1


Annotated TAIR IDAT3G16230.2
Annotated Gene NamePredicted eukaryotic LigT
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:5500563-5503303 | Forward length=449
E-Value3.7E-141
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 128.416883199686
Replicate 220.788758731788
Replicate 324.453980168545
Condition 2: 8 Hour
Replicate 128.479440943583
Replicate 235.512174785672
Replicate 339.144082869994
Condition 3: 24 Hour
Replicate 133.056216667238
Replicate 226.233767576601
Replicate 331.010586541568


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_8375.p1 GENE.R_Transcript_8375~~R_Transcript_8375.p1 ORF type:complete len:607 (+),score=106.13,AKAP7_NLS|PF10469.5|4.2e-69,KH_1|PF00013.25|1.8e-05 R_Transcript_8375:121-1941(+)
ATGACTGCTTATAGTTCGAGGACTTTATCCAGGTACTCCATACACAAACCCCTCCACTTTGATTTCCTTGTTCTATCTCTCTCTACCTCAATCATTCATCACTTTAGTCTACCAAAAAAAAAAAAAATCATTCATCACTTAAAGACTCACAAAATTTGGTTTTTTTCCCCTTTTTCTCACTTGTCTAATACCAAACCCATTATTAATGGTTTCTTCTCTCCTGTTACGCAGAATTCCTCTAGTGTTTCAGTTTACAAGCTCTTATTACACCATCGTCAATCTTACAAGGGAAACCACTCTTATCATGGATTAAGATATATTAGCAAGAAAAGTGTGACAAAGGGTGTTCAGTGTCCAATGGGCTGGAACAAAAAGAAAAAAACTGGTACTCCTGTTTGGAGACCAATCAGTAGCCAGTGCAGTTCCAACGAAGAGTGCTTAGAGGGGGATGTAATGGCTGATCCTCAAGATAATGCCAGCATTGAACTAGATGAACATGAGAATCAGATTGTATCCGTCGTGAGAGAAATAGCTCAGTCCACTATATCACCTTCATCTTTGCAAGTTGAAAATACAGTAGCTGAAGAAGGAGTGTTGGCTATTCCAACTTCTACTTGTCAAAAGATTGGACTAAAGGATTCTGACGATATGTTGGGGGATTCCACAGCTGCTTCTGCCATGCAGAACAGCTCTGAAGTAGGAGATGATGAAAAAGCATCAAAACTGTCCAAGGAAAAACATTCTGTTTCTATGGAGATAGGTGCTTCTGTCATGCGTTTCATCAGAGGAAAAGTTGGATCTATGCAGAAAAGTCTGGAAGAGGACATGGGAGTAAAAATAATATTTCCATCATCAAAAATGGAAGACTCCATTGTATTCGAAGGCGAATCTGTTGATGTAATCAATAAAGCTTCGGAAAAGATCCAAGCTATCATTGACGAGGCGGTCAAGAGCCCGGCTTTTCAGTACTCTCACTTTGTCTCGCTTCCATTGGCTATATACCCTGAGCTGGTTGATAAGCTTGCGAGATTTCAGTGCACCATACTCGGTGATTGTGATACTAAAGATGTAGAAGAGACTGCAGATGATGTTTCTACTGAAGAGGATGAAGATAAAATTGATCAACCTGGGAAAACACCTGATGTTGCTGTCAAACTTCAAGTTGAAGATGACTTCAATCATGTTAATGTCTCTATGAAAATACCTCTTGTAAGCTATGCACCTAAAGCATCAAAGTCTCGTACTTTATCAGACTTAGGAATCGACAAATCTATATTCATTAAGCCGAAAACATTTCACTTGACCGTACTAATGCTGAAGCTGTGGAACAAGGAACGTATTTATGCAGCCACTGAGGTTTTGCAGATTGTATCTTCTAAAGTAATTGAGGTCTTGGACAATCGACCTTTGTTTGTAAGACTTAAGGGGCTGGATTGCATGAGAGGATCCAGGGCAAAGGCTCATGTCCTTTATGCTCCTGTAGAAGAAGTAGGCAATGAGGATCGACTTTCACGTGCATGTCAAGTGATAATTGATGCATATGTCAAAGCTGGTCTTGTTCTTGAGAGAGATATAGGACAAAAATTAAAGTTGCATGCTACTGTGATGAATACAACACATAGGAGGACACACAACAGGACGGGCAGAAAGAGATCGGAACCATTTGATGCCAGAGGCATATTTGATAAGTTTGGGTCCGAACATTGGGGAGATTATCATATCCGTGAAGCTCATCTGTCTCAAAGGTTTTTGTATGACGACAATGGCTATTACCACTGTTGTGCCTCCATCCCATTTCCCGAAAATGCTTCAAGTTCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_8375.p1 GENE.R_Transcript_8375~~R_Transcript_8375.p1 ORF type:complete len:607 (+),score=106.13,AKAP7_NLS|PF10469.5|4.2e-69,KH_1|PF00013.25|1.8e-05 R_Transcript_8375:121-1941(+)
MTAYSSRTLSRYSIHKPLHFDFLVLSLSTSIIHHFSLPKKKKIIHHLKTHKIWFFSPFSHLSNTKPIINGFFSPVTQNSSSVSVYKLLLHHRQSYKGNHSYHGLRYISKKSVTKGVQCPMGWNKKKKTGTPVWRPISSQCSSNEECLEGDVMADPQDNASIELDEHENQIVSVVREIAQSTISPSSLQVENTVAEEGVLAIPTSTCQKIGLKDSDDMLGDSTAASAMQNSSEVGDDEKASKLSKEKHSVSMEIGASVMRFIRGKVGSMQKSLEEDMGVKIIFPSSKMEDSIVFEGESVDVINKASEKIQAIIDEAVKSPAFQYSHFVSLPLAIYPELVDKLARFQCTILGDCDTKDVEETADDVSTEEDEDKIDQPGKTPDVAVKLQVEDDFNHVNVSMKIPLVSYAPKASKSRTLSDLGIDKSIFIKPKTFHLTVLMLKLWNKERIYAATEVLQIVSSKVIEVLDNRPLFVRLKGLDCMRGSRAKAHVLYAPVEEVGNEDRLSRACQVIIDAYVKAGLVLERDIGQKLKLHATVMNTTHRRTHNRTGRKRSEPFDARGIFDKFGSEHWGDYHIREAHLSQRFLYDDNGYYHCCASIPFPENASSS*

Click here to download the sequence:
Link to NCBI Protein BLAST