Transcript Information: R_Transcript_83761.p1


Annotated TAIR IDAT1G20720.1
Annotated Gene NameRAD3-like DNA-binding helicase protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:7185658-7192794 | Reverse length=1175
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.7827785029425
Replicate 22.1837446503854
Replicate 33.2648277775718
Condition 2: 8 Hour
Replicate 12.7164595935311
Replicate 22.2739879838494
Replicate 33.929585966355
Condition 3: 24 Hour
Replicate 15.0054387098923
Replicate 23.6872042983477
Replicate 35.7164344290125


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_83761.p1 GENE.R_Transcript_83761~~R_Transcript_83761.p1 ORF type:complete len:1298 (+),score=243.48,Helicase_C_2|PF13307.2|2.1e-60,DEAD_2|PF06733.11|1.8e-42 R_Transcript_83761:216-3896(+)
ATGGCGTTCATGTCTAGGGTAATCTCAACCCTAGATCGAGCTCAAAGGGACGGCCATTGCCACGCTTTGCTCGAGTCTCCGACCGGCACCGGCAAGTCTCTCTCTCTCCTCTGCTCTGCCATTGCCTGGCAGCAGCAACGTGGTCCTAAGTCTGTAAACCCTAACCCTAGTAATCAACCTCAGTCTCGACCCGATTCTAGAGCTTCTTCCGATCCTCTCAATCATGGCGGTGGTTTTGTCGTCGATTCCCAGCTCTCTGAAACTCCTACACCAGAAGCAGCTGCCCCTGCTGTGAATGGCAAAAGTAAAAAACAGAAGCCGGTGCCTACCATATTTTATGCATCGAGAACTCACTCACAGATCTCCCAAGTAATTCGTGAGTACCGAAAGACTACATATAGGATCTCAATGGCCATTTTGGCATCAAGAAAATATTATTGCACAAATGCAAGAGTACGTTCTGGAGATAATTTGGATGAGGATTGCAAGTTACTCCTTGAAGACAAGGAAGCTGGATGTCCACAGTTCAAGAATGCTCATAGAGTTAGAAATCACCCATCTTTTCAGAGAGGAGGGTGTCATGAGGTACATGATATCGAGGACCTCGTCAAAGTGGGGAAAACAGTAAAAGGTTGCTCATACTTTGCAGCGCGTTCGATGGCTGATGACGCGCAAATAGTTTTTTGCCCATACAGTTATATCATTAACCCAATTGTTAGAAAAGCAATGGAAGTTGATATCAAGGGAGCAATTCTCATTCTTGATGAAGCACATAATATAGAGGACCTGTCTCGAGAAGTGGGAAGTGTGGATGTTGATGAAGATGCCCTGCAAAAACTGCAGACAGAGCTAGGCCAACTCTGTGGAGCTGACGCACTGACTTACCAGCCTCTATATGAGATGGTGCAAGATGTCATAAGCTGGATGGAACGCCGGAAAGATGCTTTAGAAAAGCGTGAGTTTCTGCACTATTTTTCATGTTGGACTGGAGATAAGGCTTTAAGGGAGCTTCAAGAGGCAAACATATCACAACAGTGCTTCCCAATCTTGCAAGAGTGTGCCGCCAAGGCAATTCGAGCTGCATCTGATGCAGAGCAAGGATTACCTCATTTAAGCGGCATGTCGAGATTTATTTTAGAAGGCCTCTTCTCTTCTCTTAGTTACTTTTTCCACGGAAATGGGAGTCACATAAATGATTACCAGCTTGTTATACAACGTTTTGTCAAAAAAGATTCTGTGAATCCTTCAGGTAGCTGGAAACTTACTTTGGGTTTATGGTGCTTGAACCCAGCTGTTGTATTTAGAGATATTGCTGATCTATCATTGTCGGTCATCTTAACATCTGGGACTCTGTCACCAATGACTTCATTTTCATCTGAACTTGGGGTCCCATTTGGTACTTTGTTGGAGGCTCCGCATGTGATTAATGTTGATTCACAGGTCTGGGCCTCTATAATTTCTACTGGTCCATGTGACTATCCGCTAAATGCAAGCTATAAAACAGCTGATGGATATGCCTTTCAGGATGCTGTTGGTAAATCCCTGGAGGAGGTCTTCAAGGTTGTTCCTGGTGGGTCACTTGTCTTCTTTCCGAGCTATAAATTGATGGAGAAACTATGTAAAAGGTGGCGTGAAACAGGTCAATGGTCTCGGCTCAATAGACGGAAAACTCTCTTCATTGAAGCCAGAGGGGGAAGCCAAGAGGATTTTGAGACTGTTTTGAAGGGCTATTACAGTTCAATTCGTCCAGGCAGGAAGCTGTCTCTTGGAAAAAGGCGGAAGGCTAAGAAAGTGGATGTCAATGATTGTACCACAACTGATTCACTTGATACATGTAAGGAGGGCGCCGCCTTTCTTGCAGTTTGCCGCGGGAAGGTGTCGGAAGGAATTGACTTTTCAGATGATAATGCTCGAGCTGTTATAATTGTTGGTATTCCCTTTCCAAATATAAACGATGTCCAAGTTGCAGAAAAGAAGAAATACAATGACACATATAGACTTTCCAAAAATCTCCTGAGTGGGAGTGACTGGTACTGCCAACAAGCTTTTCGAGCATTGAATCAGGCAGCAGGCCGATGTATTCGTCATAAGTCTGACTACGGGGCTGTCATCTTTTTAGATGAGCGCTTTCGGGAGGAAAGAAACACAGCCTACATTTCAAAATGGCTTAGGAAATCAATTAGGACATATGAAAAGTTTGAAACATCAATTGAGGAATTGAGATCTTTCTTCTGTAACGTTAAGGAGCAGGTTGGGGATGCTATTATGTTGGATAATCCTGTCACTGGTTTAGAGAATATTCCTCCTGATAATTCGAACAAAGGAAGTGTCAAACGGAAAAGCCAGAAGTTCAGCAAATCTGAAGTTGGTCCAAAGAGAACGGTTTTGGACAATATGGTGATGACATCTCCTCTTTCTCACTGTCTACCATTTAAACCTCATGGTATTACTGGTTATAGGACAGCAAAATCTCAATGCTATGAGGAAATTCAGGAATCTTCCCCAGTCAATCTGGAAAATTTTGAGAACCAGATAAAGACTACTGAATCTGGTTGCAATTGCAGTGAGGACACAAGGTGCGAAGTGTCATTGGCATCTCCATTGGATGAAAGTCCGGAACTCTCTGTTGTCAAGGAGACTCCTGTGGCTGGAAGCTGTACTGTAGCTAGTCCTGAAGCATCCATGAATGATGACAACTCTAACTCGACCATAATCCAAACTTTTTGCGAGTTTGGTCAAGTAAATTCTTTGTCCAGTTCCATAGAGGTCACTCCGGAAAGGAATTCCAGAGGAAACGCTGAAGTGTCACTGCCAGAAATAGATTCCACAGTAAATTTGAGTGTTAATTCACGTGCCCAGAAAAAGAGGGCATTGCTTGATTTGTCACTGGTAAACCCCATTCAGGATATGAAATTTGATGTTGGGACTGGAGAAGTAACGGATGACTTCACAGGGATGGACTATACAGTGGCAAATGGCAATTCAATTGCAAGAATCAAACCTGCTCGAAAGACAAATTCCTTAGAATGTGAACCTAAGTATTCTAGAGCAAATGAGGACACTAAATCTCCAAAGTCTTCTGGCCTCTTTCTTGACCAACAATTACAAGTTTTTTGTGCACTCTGCAGAAGTCCACTGGGCCGGCCTGAAAACAATTCATATATCTCATGTTCCTCGACTTCATTATCAAAAGTCATGCTGACTTCTCTTTCTGAAGGAGAAGGGCAACAAGCCAGGCTGACATCACCATCTCTACTGCCTATCCTGATTGCCGATGTTTTATCAGTTGATCGGCGAATTTTTAGTAGGAACAAGGACATTCCAGGACAGGGAATCTGGTCCCAAGATGATGGATGTGTATACAATACCATTTTCTGTCCTTTCTGTGTTTCTCTAAATCACTGTCTTGGAGTGCAGATCCTGGCCACAGATGCTTCAAATCTTCAGCTTATTAACAAGATACTCTTTCTTAGTGACCGGTTAGAAGTTAGGAGTGACCAAAGATTAAAGAGAAAGGATTCTTTGGTGAACAATGGTTCACAAGCCAATGAGATTGTTGATATAAATTCCATCTGTAAATATGCATACCAACCTCAGCAACAGAGTCCAGGAGGCTGGAGAATGACCAAACAAAAGTCAAGAATACTGAAAAGGAGTCCTACTTCACAATTCCAGACCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_83761.p1 GENE.R_Transcript_83761~~R_Transcript_83761.p1 ORF type:complete len:1298 (+),score=243.48,Helicase_C_2|PF13307.2|2.1e-60,DEAD_2|PF06733.11|1.8e-42 R_Transcript_83761:216-3896(+)
MAFMSRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSAIAWQQQRGPKSVNPNPSNQPQSRPDSRASSDPLNHGGGFVVDSQLSETPTPEAAAPAVNGKSKKQKPVPTIFYASRTHSQISQVIREYRKTTYRISMAILASRKYYCTNARVRSGDNLDEDCKLLLEDKEAGCPQFKNAHRVRNHPSFQRGGCHEVHDIEDLVKVGKTVKGCSYFAARSMADDAQIVFCPYSYIINPIVRKAMEVDIKGAILILDEAHNIEDLSREVGSVDVDEDALQKLQTELGQLCGADALTYQPLYEMVQDVISWMERRKDALEKREFLHYFSCWTGDKALRELQEANISQQCFPILQECAAKAIRAASDAEQGLPHLSGMSRFILEGLFSSLSYFFHGNGSHINDYQLVIQRFVKKDSVNPSGSWKLTLGLWCLNPAVVFRDIADLSLSVILTSGTLSPMTSFSSELGVPFGTLLEAPHVINVDSQVWASIISTGPCDYPLNASYKTADGYAFQDAVGKSLEEVFKVVPGGSLVFFPSYKLMEKLCKRWRETGQWSRLNRRKTLFIEARGGSQEDFETVLKGYYSSIRPGRKLSLGKRRKAKKVDVNDCTTTDSLDTCKEGAAFLAVCRGKVSEGIDFSDDNARAVIIVGIPFPNINDVQVAEKKKYNDTYRLSKNLLSGSDWYCQQAFRALNQAAGRCIRHKSDYGAVIFLDERFREERNTAYISKWLRKSIRTYEKFETSIEELRSFFCNVKEQVGDAIMLDNPVTGLENIPPDNSNKGSVKRKSQKFSKSEVGPKRTVLDNMVMTSPLSHCLPFKPHGITGYRTAKSQCYEEIQESSPVNLENFENQIKTTESGCNCSEDTRCEVSLASPLDESPELSVVKETPVAGSCTVASPEASMNDDNSNSTIIQTFCEFGQVNSLSSSIEVTPERNSRGNAEVSLPEIDSTVNLSVNSRAQKKRALLDLSLVNPIQDMKFDVGTGEVTDDFTGMDYTVANGNSIARIKPARKTNSLECEPKYSRANEDTKSPKSSGLFLDQQLQVFCALCRSPLGRPENNSYISCSSTSLSKVMLTSLSEGEGQQARLTSPSLLPILIADVLSVDRRIFSRNKDIPGQGIWSQDDGCVYNTIFCPFCVSLNHCLGVQILATDASNLQLINKILFLSDRLEVRSDQRLKRKDSLVNNGSQANEIVDINSICKYAYQPQQQSPGGWRMTKQKSRILKRSPTSQFQT*

Click here to download the sequence:
Link to NCBI Protein BLAST