Transcript Information: R_Transcript_8386.p1


Annotated TAIR IDAT3G16230.2
Annotated Gene NamePredicted eukaryotic LigT
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:5500563-5503303 | Forward length=449
E-Value2E-82
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.7736458603014
Replicate 20.89647125372958
Replicate 32.1105084077354
Condition 2: 8 Hour
Replicate 10.88039064978859
Replicate 22.0099669070729
Replicate 34.8540262108451
Condition 3: 24 Hour
Replicate 13.6113404627849
Replicate 21.536433765411
Replicate 32.4101068082202


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_8386.p1 GENE.R_Transcript_8386~~R_Transcript_8386.p1 ORF type:3prime_partial len:445 (+),score=90.98,AKAP7_NLS|PF10469.5|6.2e-37,KH_1|PF00013.25|1.2e-05 R_Transcript_8386:73-1404(+)
ATGATTGCTTATAGTTCGAGGACTTTATCCAGAATTCCTCTAGTGTTTCAGTTTACAAGCTCTTATTATACCATCGTCAATCTTACAAGGTATTTGCAGGGAAACCACTCTTATCATGGATTAAGATATATTAGCAAGAAAAGTGTGACAAAGGGTGTTCAGTGTCCAATGGGCTGGAACAAAAAGAAAAAAACTGGTACTCCTGTTTGGAGACCAATCAGTAGCCAGTGCAGTTCCAACGAAGAGTGCTTAGAGGGGGATGTAATGGCTGATCCTCAAGATAATGCCAGCATTGAACTAGATGAACATGAGAATCAGATTGTATCCGTCGTGAGAGAAATAGCTCAGTCCACTATATCACCTTCATCTTTGCAAGTTGAAAATACAGTAGCTGAAGAAGGAGTGTTGGCTATTCCAACTTCTACTTGTCAAAAGATTGGACTAAAGGATTCTGACGATATGTTGGGGGATTCCACAGCTGCTTCTGCCATGCAGAACAGCTCTGAAGTAGGAGATGATGAAAAAGCATCAAAACTGTCCAAGGAAAAACATTCTGTTTCTATGGAGATAGGTGCTTCTGTCATGCGTTTCATCAGAGGAAAAGTTGGATCTATGCAGAAAAGTCTGGAAGAGGACATGGGAGTAAAAATAATATTTCCATCATCAAAAATGGAAGACTCCATTGTATTCGAAGGCGAATCTGTTGATGTAATCAATAAAGCTTCGGAAAAGATCCAAGCTATCATTGACGAGGCGGTCAAGAGCCCGGCTTTTCAGTACTCTCACTTTGTCTCGCTTCCATTGGCTATATACCCTGAGCTGGTTGATAAGCTTGCGAGATTTCAGTGCACCATACTCGGTGATTGTGATACTAAAGATGTAGAAGAGACTGCAGATGATGTTTCTACTGAAGAGGATGAAGATAAAATTGATCAACCTGGGAAAACACCTGATGTTGCTGTCAAACTTCAAGTTGAAGATGACTTCAATCATGTTAATGTCTCTATGAAAATACCTCTTGTAAGCTATGCACCTAAAGCATCAAAGTCTCGTACTTTATCAGACTTAGGAATCGACAAATCTATATTCATTAAGCCGAAAACATTTCACTTGACCGTACTAATGCTGAAGCTGTGGAACAAGGAACGTATTTATGCAGCCACTGAGGTTTTGCAGATTGTATCTTCTAAAGTAATTGAGGTCTTGGACAATCGACCTTTGTTTGTAAGACTTAAGGGGCTGGATTGCATGAGAGGATCCAGGGCAAAGGCTCATGTCCTTTATGCTCCTGTAGAAGAAGTAGGCAATGAGGATCGACTTTCACGTGCATGT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_8386.p1 GENE.R_Transcript_8386~~R_Transcript_8386.p1 ORF type:3prime_partial len:445 (+),score=90.98,AKAP7_NLS|PF10469.5|6.2e-37,KH_1|PF00013.25|1.2e-05 R_Transcript_8386:73-1404(+)
MIAYSSRTLSRIPLVFQFTSSYYTIVNLTRYLQGNHSYHGLRYISKKSVTKGVQCPMGWNKKKKTGTPVWRPISSQCSSNEECLEGDVMADPQDNASIELDEHENQIVSVVREIAQSTISPSSLQVENTVAEEGVLAIPTSTCQKIGLKDSDDMLGDSTAASAMQNSSEVGDDEKASKLSKEKHSVSMEIGASVMRFIRGKVGSMQKSLEEDMGVKIIFPSSKMEDSIVFEGESVDVINKASEKIQAIIDEAVKSPAFQYSHFVSLPLAIYPELVDKLARFQCTILGDCDTKDVEETADDVSTEEDEDKIDQPGKTPDVAVKLQVEDDFNHVNVSMKIPLVSYAPKASKSRTLSDLGIDKSIFIKPKTFHLTVLMLKLWNKERIYAATEVLQIVSSKVIEVLDNRPLFVRLKGLDCMRGSRAKAHVLYAPVEEVGNEDRLSRAC

Click here to download the sequence:
Link to NCBI Protein BLAST