Transcript Information: R_Transcript_83970.p1


Annotated TAIR IDAT4G39850.3
Annotated Gene Nameperoxisomal ABC transporter 1
Annotated Gene Symbol(s)PXA1
Annotation TypeOrtholog
Chromosome Positionchr4:18489220-18496762 | Forward length=1352
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 116.343084621639
Replicate 29.6350735841607
Replicate 311.658810390867
Condition 2: 8 Hour
Replicate 113.45075540824
Replicate 217.631338073581
Replicate 325.490938980349
Condition 3: 24 Hour
Replicate 116.797977037311
Replicate 213.648545860537
Replicate 317.89622490842


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_83970.p1 GENE.R_Transcript_83970~~R_Transcript_83970.p1 ORF type:complete len:1338 (+),score=242.30,ABC_membrane_2|PF06472.11|2.5e-86,ABC_membrane_2|PF06472.11|1.1e-82,ABC_tran|PF00005.23|4.1e-19,ABC_tran|PF00005.23|8.2e-15,AAA_21|PF13304.2|1.1e+04,AAA_21|PF13304.2|0.0002,AAA_21|PF13304.2|6.4e+03,AAA_21|PF13304.2|0.0017,AAA_21|PF13304.2|2.3e+03,AAA_29|PF13555.2|0.00092,AAA_29|PF13555.2|0.027,AAA_23|PF13476.2|0.004,AAA_23|PF13476.2|0.13,AAA_16|PF13191.2|0.092,AAA_16|PF13191.2|0.028,SMC_N|PF02463.15|0.15,SMC_N|PF02463.15|1e+03,SMC_N|PF02463.15|0.21 R_Transcript_83970:562-4575(+)
ATGCCTTCTCTTCAACTTCTGCAATTAACAGAGCATGGCCGCAGCTTCCTTGCTTCAAGAAGGAAGACTTTACTGCTGGCCAGTGGTATTGTAGCAGCAGGTGGAGCAGCTGCATACATGCAATCAAGACTGGGCCATAAGCGGTCTAGCTCTTCTGGTCATTGCAATGGGCCTGGCAGCTTGACCAAGGATTCTGAAAATGATACTGCCGGGGTAACTGTTTATAAAGACAAGAGACAAAAGAAGAGCGGTTTGAGGTCTCTTCAGGTCCTAGCAGCCATTCTTCTGTCACAAATGGGTAGGAGGGGGGCTCGCGACCTTTTATCGTTGGTTTCTGTAGTGGTGTTGCGAACTGCTTTAAGCAATAGGCTGGCCAAAGTGCAAGGCTTTCTATTTCGGGCTGCTTTTCTTCGCCGAGTGCCAACCTTTTTCAGATTAATAATTGAAAATGTTGTATTATGTTTTCTTCTATCAACCTTACAATCTACCTCGAAGTACATAACGGGGGCCTTAAGCTTGCGGTTTAGGAAAATACTGACAAAGCTTATTCACACGCATTATTTTGAGAATATGGCATACTACAAACTATCCCATGTTGATGGCCGGATAACTAATCCAGAACAACGAATTGCTAGTGATGTTCCAAGGTTCTGCTCCGAGTTAAGCGACCTTGTACAGGAAGATCTGACTGCGGTTACTGATGGACTGCTCTATACATGGCGCCTCTGTTCTTATGCAAGCCCGAAATATATATTCTGGATTTTGGCTTATGTACTAGGAGCAGGGACCATGATTCGAAATTTTTCTCCTGCATTTGGGAAGCTGATGTCAAAAGAGCAACAGCTGGAGGGGGAATATAGACAGCTTCACTCACGGTTAAGGACCCATTCTGAAAGTATAGCATTTTATGGAGGAGAAGCTAGAGAAGAGTTTCATATTCTGCAAAAGTTTAAGAATTTAGTGAAGCATATGGGTATTGTTCTTCATGATCACTGGTGGTTTGGGATGATCCAAGACTTCTTGTTGAAGTACCTTGGTGCCACAGTTGCTGTTGTTCTTATTATTGAACCCTTTTTTTCCGGTGACCTGAGACCTGATTCTTCAACCTTAGGCCGTGCTGAAATGTTAAGCAATCTTAGATATCATACAAGTGTTATTATTTCACTATTTCAGTCTCTGGGAACTCTGTCCATCAGCTCAAGACGACTCAATCGTCTCAGTGGTTATGCAGACCGCATCCATGAACTAATTGCTGTTTCACAAGAACTTGGTTTTCGTGATAACTCTTCACAGAGAAATGGCAACAAAGATTGTTTTAGTGAGGCCAAGTACATCGAATTTTCTGGTGTCAAGGTTGTTACTCCATCTAACAATGTGCTGGTGGAAGACCTGACACTCAAAGTTGAACCAGGATCTAACCTATTAATCACAGGTCCAAATGGTAGTGGCAAAAGCTCACTTTTCCGAGTGTTAGGAGGACTTTGGCCTCTAATCTCTGGACATATTGCAAAGCCTGGAGTTGGGTCTGATCTTAATAAAGAGATATTTTATGTGCCGCAAAGACCATATACAGCGGTTGGCACACTTCGGGATCAGTTGATTTATCCGCTCAGTGCAGATCAGGAAGTTGAGCCTCTGACACGTAGTGGAATGATAGAGTTGCTGAAAAATGTTGATCTTGAGTATCTTCTTGATCGCTATCCTCCTGACACAGAGGTGAATTGGGGTGAGGAACTCTCTCTTGGGGAGCAACAGCGCCTGGGAATGGCAAGATTGTTCTATCACAAGCCTAAGTTTGCTATTCTTGATGAGTGCACAAGTGCAGTGACGACTGATATGGAAGATCGTTTTTGTGCTAAGGTCCGGGCTATGGGAACTTCATGTATCACCATATCACATCGTCCTGCATTAGTTGCATTTCATGATGTTGTACTGTCCTTGGATGGTGAAGGAGGATGGAGTGTCCACTACAAAAGGGAAGATTCTCCTGTAGAAGATGAGAATCCAATGAATGCGGGCAAACCTTTAGAGTCTCACCGCCAAAATGATGCAATGACTGTACAGCGAGCTTTTGCTACAGTTAAGAGTAAGAAGGGCTCTACCTTCTCCAGATCAAACTCAGAATCATATATCATGGATATTGTAGGGGCATCTCCTTCTCTAGATCGAGCTACAGCTTTGCCCCATGTTCCACAACTACAAATTTCTCCCAGGATGTTGCCTTTGCGAGTTGCAAATATGTTCAGGATATTGGTACCCACTGTGTTTGATAAGCAGGGAGCACAGTTGCTTGCCGTTGCCTTTTTGGTGGTCTCAAGAACATGGGTTTCCGACCGTATCGCCTCTTTAAATGGAACAACTGTGAAGTATGTTTTGGAGCAGGATAAGGCATCCTTTATCCGACTGATTGGGGTCAGCGTTCTCCAAAGTGGCGCTTCTTCATTTATTGCTCCTTCGATAAGGCACCTAACAGCTAGGTTGGCGCTGGGTTGGAGGGTTCGATTGACTCAACATATACTCAAGAACTACTTAAGGAACAATGCATTTTATAAGGTATTTCACATGTCGAGCAAAAGCATTGATGCAGATCAGAGAATTACCCAGGATCTTGAAAAGCTAACCACAGATTTATCGGGGCTTGTCACTGGAATGGTGAAGCCAACTGTGGACATTCTCTGGTTCACATGGAGAATGAAGCTGTTAACTGGTAGAAGAGGTGTTATTATCTTATATGCATATATGTTGCTTGGTTTGGGCTTTCTGAGGAGTGTGGCTCCTGATTTTGGTGATCTCACAAGCCAAGAACAACAGCTTGAAGGGACCTTCAGGTTCATGCATGAAAGATTGCGTACGCATGCAGAATCTGTTGCTTTCTTTGGAGGGGGTGCACGGGAAAAAGCAATGATTGAATCAAAATTTGAGAAGCTTCTCAGTCACTCTTTGCTACTGATGAGAAGGAAATGGCTATATGGCATACTTGATGATTTCATCACAAAGCAACTCCCACACAATGTCACCTGGGGACTGAGCTTATTGTATGCCTTGGAACATAAGGGAGATCGGTCTCTGACTTCCACACAAGGTGATCTAGCTCATGCACTGCGATTCTTGGCATCAGTTGTTTCTCAAAGCTTCTTGGCCTTTGGTGACATTCTTGAGCTACACAGGAAGTTTCTTGAGCTTTCTGGTGGTATCAATCGAATTTTTGAGCTGGAAGAGTTCTTAGATGCTGCTCAATCTGGTCACATGGCTCGTCCCTCACTGGGATATGAGGGCAACAGTTCTCACTCTAAAGACATGATAGCATTTTCTGATGTTGATATTATAACCCCATCCCAGAAATTATTAGCTAGGCGCTTGACATGTGATATCGTACAAGGAAAAAGCCTTCTTGTTACTGGACCAAACGGTAGTGGAAAAAGTTCAGTTTTCAGAGTTCTTCGTGGTCTGTGGCCTATTGTTAGTGGAAGACTCATCAAACCAAGCCAACTTTATGATGATGGGATTGAATCAGAATGTGGTATATTTGTTGTTCCACAACGACCATATACGTGCCTTGGAACCCTCAGGGATCAGATTATATATCCTCTCTCTCATGAGGAAGCAGAGATAAGGGCAGTACACATGCATAGAGGTCAGCAGACTGTTCATGCCACAGATATACTAGATATGCAGTTGAAAACAATTCTGGAGAATGTTAAACTGATTTATTTATTGGAGAGAGAAGGTGGATTGGGTGCTACTCTAAACTGGGAAGATGTTCTCTCTCTTGGAGAGCAGCAGAGATTAGGAATGGCACGCCTGTTCTTCCACAAGCCTAAATTTGCTATCCTTGATGAGTGCACCAATGCAACGAGTGTTGATGTTGAAGAGCACTTGTATACGCTTGCAACCAACCTAGGAATTACAGTTATTACTTCCTCACAGCGCCCTGCATTAATTCCATTCCACAGATTGGAATTACGATTGATTGATGGGGAGGGTAACTGGGAGCTTCGTAAAATTAGGCAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_83970.p1 GENE.R_Transcript_83970~~R_Transcript_83970.p1 ORF type:complete len:1338 (+),score=242.30,ABC_membrane_2|PF06472.11|2.5e-86,ABC_membrane_2|PF06472.11|1.1e-82,ABC_tran|PF00005.23|4.1e-19,ABC_tran|PF00005.23|8.2e-15,AAA_21|PF13304.2|1.1e+04,AAA_21|PF13304.2|0.0002,AAA_21|PF13304.2|6.4e+03,AAA_21|PF13304.2|0.0017,AAA_21|PF13304.2|2.3e+03,AAA_29|PF13555.2|0.00092,AAA_29|PF13555.2|0.027,AAA_23|PF13476.2|0.004,AAA_23|PF13476.2|0.13,AAA_16|PF13191.2|0.092,AAA_16|PF13191.2|0.028,SMC_N|PF02463.15|0.15,SMC_N|PF02463.15|1e+03,SMC_N|PF02463.15|0.21 R_Transcript_83970:562-4575(+)
MPSLQLLQLTEHGRSFLASRRKTLLLASGIVAAGGAAAYMQSRLGHKRSSSSGHCNGPGSLTKDSENDTAGVTVYKDKRQKKSGLRSLQVLAAILLSQMGRRGARDLLSLVSVVVLRTALSNRLAKVQGFLFRAAFLRRVPTFFRLIIENVVLCFLLSTLQSTSKYITGALSLRFRKILTKLIHTHYFENMAYYKLSHVDGRITNPEQRIASDVPRFCSELSDLVQEDLTAVTDGLLYTWRLCSYASPKYIFWILAYVLGAGTMIRNFSPAFGKLMSKEQQLEGEYRQLHSRLRTHSESIAFYGGEAREEFHILQKFKNLVKHMGIVLHDHWWFGMIQDFLLKYLGATVAVVLIIEPFFSGDLRPDSSTLGRAEMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELIAVSQELGFRDNSSQRNGNKDCFSEAKYIEFSGVKVVTPSNNVLVEDLTLKVEPGSNLLITGPNGSGKSSLFRVLGGLWPLISGHIAKPGVGSDLNKEIFYVPQRPYTAVGTLRDQLIYPLSADQEVEPLTRSGMIELLKNVDLEYLLDRYPPDTEVNWGEELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEDRFCAKVRAMGTSCITISHRPALVAFHDVVLSLDGEGGWSVHYKREDSPVEDENPMNAGKPLESHRQNDAMTVQRAFATVKSKKGSTFSRSNSESYIMDIVGASPSLDRATALPHVPQLQISPRMLPLRVANMFRILVPTVFDKQGAQLLAVAFLVVSRTWVSDRIASLNGTTVKYVLEQDKASFIRLIGVSVLQSGASSFIAPSIRHLTARLALGWRVRLTQHILKNYLRNNAFYKVFHMSSKSIDADQRITQDLEKLTTDLSGLVTGMVKPTVDILWFTWRMKLLTGRRGVIILYAYMLLGLGFLRSVAPDFGDLTSQEQQLEGTFRFMHERLRTHAESVAFFGGGAREKAMIESKFEKLLSHSLLLMRRKWLYGILDDFITKQLPHNVTWGLSLLYALEHKGDRSLTSTQGDLAHALRFLASVVSQSFLAFGDILELHRKFLELSGGINRIFELEEFLDAAQSGHMARPSLGYEGNSSHSKDMIAFSDVDIITPSQKLLARRLTCDIVQGKSLLVTGPNGSGKSSVFRVLRGLWPIVSGRLIKPSQLYDDGIESECGIFVVPQRPYTCLGTLRDQIIYPLSHEEAEIRAVHMHRGQQTVHATDILDMQLKTILENVKLIYLLEREGGLGATLNWEDVLSLGEQQRLGMARLFFHKPKFAILDECTNATSVDVEEHLYTLATNLGITVITSSQRPALIPFHRLELRLIDGEGNWELRKIRQ*

Click here to download the sequence:
Link to NCBI Protein BLAST