Transcript Information: R_Transcript_83987.p1


Annotated TAIR IDAT5G61000.1
Annotated Gene NameReplication factor-A protein 1-related
Annotated Gene Symbol(s)RPA70D, ATRPA70D
Annotation TypeOrtholog
Chromosome Positionchr5:24549682-24552641 | Reverse length=629
E-Value4.8e-320
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 130.985514206059
Replicate 227.92678656997
Replicate 330.54231679487
Condition 2: 8 Hour
Replicate 122.574773048924
Replicate 219.452149243958
Replicate 333.735432421305
Condition 3: 24 Hour
Replicate 150.843143811598
Replicate 247.33811664319
Replicate 353.09992746805


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_83987.p1 GENE.R_Transcript_83987~~R_Transcript_83987.p1 ORF type:complete len:615 (+),score=130.71,Rep_fac-A_C|PF08646.6|16,Rep_fac-A_C|PF08646.6|2.2e-41,REPA_OB_2|PF16900.1|4.5,REPA_OB_2|PF16900.1|1.2e-23,Rep-A_N|PF04057.8|4.8e-20,Rep-A_N|PF04057.8|1.2e+04,tRNA_anti-codon|PF01336.21|3.1e-11,tRNA_anti-codon|PF01336.21|9.3,DUF223|PF02721.10|5.4e-06 R_Transcript_83987:237-2081(+)
ATGAAGGTGAAAACAGTAACCCAAGACGCAATTTCGAAGATAATAGCAAACCCATCTCCAGATTCATCTTCTGATGTTCCTGATCTCGTTGTGCAAGTCCTCGATCTCCGAGCTGTTGGCTCTAGATTCATGTTTACAGCCAGTGATGGGAAACAAAAGCTAAAAGGAATCCTACAATCAAGTTTCTCAGATATGGTATCATCAGGGGACATTCAGAGTCTGGGTTTGATTCGGATTCTTGATTATACCCTCAATGACATCCCAAACAAGCCTGACAAATATCTGATTGTAACAAAGTGTGAGTCGGTATCTCCTGCCCTTGAGTTGGAGATTAAGGCGGAGGTGAAGACTGAGGATTTGAGGGCTGAGGTTAAGGCAGAAGATGCTGGTATTGTGTTGAAGCCTAAGCAAGAAGTTGTTGCTAAATCAGCTGCTCAGATAGTAAATGAGCAAAGGGGCAATATGGCGCCTGCTGCGAGAATGGCTATGACTAGAAGAGTTCACCCTTTGGCTTCTTTGAACCCTTACCAGGGTAACTGGACAATAAAGGTCCGAGTTACCAGCAAAGGGCAATTGCGAAGCTACAAAAATGCAAGAGGAGAAGGCAATGTTTTTAATGTTGAATTGACTGATGAAGATGGTACTCAAATACAAGCGACAATGTTTAATGAAGCTGCGAGGAAGTTCTTTGAGAAGTTTCAAGTGGGGAAGGTTTTTTACATATCAAAAGGGACTCTGAAACTTGCTAATAAGCAGTACAAGACTGTCCAAAATGACTATGAAATGACCCTTAATGAGAACTCTATGGTTGAGGAAGCCAGTGATGAAGCAACATTCATTCCTGAAACAAAGTTCAACTTTGTACCCATTGATCAGCTAGGTCCCTATGTAAATGGAAGGGATGTCGTAGATGTAATTGGTGTGGTTCAAAGTGTGTCCCCGACAATGAGTATTAGGAGGAAGAGCAACAATGAGATGATCCCAAAGCGTGATATCACAATTGCTGATGAATCGAAGAAAACAGTTGTAGTCTCTTTGTGGAATGATCTTGCCACAAATGTGGGGCAAGAATTGCTCGACATGGCTGATCAGTCTCCAGTTGTTGCCATCAAGACTGTTAAAGTTGGGGACTTCCAGGGTGTGTCATTATCTGCACTCAGCAAAAGTGTAGTTCAGATCAATCCTGATCTACCGGAATCAAAGAAGTTGAAATCTTGGTATGATTCTGAAGGCAAACAGGCATCAATGGCTTCTGTAGGTGCTGGTTTGAGCCCCTCTACTAATAGTGGAGCCAGGTCCATGTACACTGACAGAGTCCCCATCTCTCACATTATAAGTAACCCATCTTTGGGAGACGATAAGCCTGTATTTTTCAGCATCAAAGCATATATAAGCCTCATTAAGTCTGATCAGACTATGTGGTATCGGGCTTGTAAGACCTGCAACAAGAAGGTTACCGAAGCCATTGGATCTGGATACTGGTGTGAGGGGTGCCAAAAGAATGACGAAGAATGCAGCTTAAGGTACGTTATGGTGGCAAGAATTTCTGATGCTAGTAGTGAGGCTTGGGTTTCTACCTTCAATGACCAAGCTGAAAGAGTTATCGGGTGCTCTGCAGATGAGCTTGACAGGTTGAAATCACAGGAGGGTGAAGAAAATCTTTACCAAACGAAACTGAAGGAAGCGACTTGGGTACCTTACAATTTCCGCGTAAGTGTGATGCAAAACGAGTACATGAACGAGAAGAGACAAAGGATTACAGTCAAAGCTGTTGCCCCGCTTGATTTTGCAGCTGAAACTAAGTATCTTCTAGAAGAGATATCTAAAATGAAAGCCTCTCAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_83987.p1 GENE.R_Transcript_83987~~R_Transcript_83987.p1 ORF type:complete len:615 (+),score=130.71,Rep_fac-A_C|PF08646.6|16,Rep_fac-A_C|PF08646.6|2.2e-41,REPA_OB_2|PF16900.1|4.5,REPA_OB_2|PF16900.1|1.2e-23,Rep-A_N|PF04057.8|4.8e-20,Rep-A_N|PF04057.8|1.2e+04,tRNA_anti-codon|PF01336.21|3.1e-11,tRNA_anti-codon|PF01336.21|9.3,DUF223|PF02721.10|5.4e-06 R_Transcript_83987:237-2081(+)
MKVKTVTQDAISKIIANPSPDSSSDVPDLVVQVLDLRAVGSRFMFTASDGKQKLKGILQSSFSDMVSSGDIQSLGLIRILDYTLNDIPNKPDKYLIVTKCESVSPALELEIKAEVKTEDLRAEVKAEDAGIVLKPKQEVVAKSAAQIVNEQRGNMAPAARMAMTRRVHPLASLNPYQGNWTIKVRVTSKGQLRSYKNARGEGNVFNVELTDEDGTQIQATMFNEAARKFFEKFQVGKVFYISKGTLKLANKQYKTVQNDYEMTLNENSMVEEASDEATFIPETKFNFVPIDQLGPYVNGRDVVDVIGVVQSVSPTMSIRRKSNNEMIPKRDITIADESKKTVVVSLWNDLATNVGQELLDMADQSPVVAIKTVKVGDFQGVSLSALSKSVVQINPDLPESKKLKSWYDSEGKQASMASVGAGLSPSTNSGARSMYTDRVPISHIISNPSLGDDKPVFFSIKAYISLIKSDQTMWYRACKTCNKKVTEAIGSGYWCEGCQKNDEECSLRYVMVARISDASSEAWVSTFNDQAERVIGCSADELDRLKSQEGEENLYQTKLKEATWVPYNFRVSVMQNEYMNEKRQRITVKAVAPLDFAAETKYLLEEISKMKASQ*

Click here to download the sequence:
Link to NCBI Protein BLAST