Transcript Information: R_Transcript_84010.p1


Annotated TAIR IDAT3G22470.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:7966066-7967925 | Reverse length=619
E-Value4E-55
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.3875180995624
Replicate 21.8604316824568
Replicate 33.769463148734
Condition 2: 8 Hour
Replicate 12.2729494887738
Replicate 21.6982948233812
Replicate 33.5996864943383
Condition 3: 24 Hour
Replicate 13.0997883176647
Replicate 23.8154667279058
Replicate 32.4935359769883


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_84010.p1 GENE.R_Transcript_84010~~R_Transcript_84010.p1 ORF type:complete len:237 (+),score=48.43,PPR_2|PF13041.2|2.1e-16,PPR_2|PF13041.2|1.8e-11,PPR_2|PF13041.2|1.8e-19,PPR_2|PF13041.2|1.4e-17,PPR_2|PF13041.2|1.7e-13,PPR_2|PF13041.2|1.4e-18,PPR_1|PF12854.3|7e-10,PPR_1|PF12854.3|4.7e-11,PPR_1|PF12854.3|3.8e-12,PPR_1|PF12854.3|5e-14,PPR_1|PF12854.3|4.1e-10,PPR_1|PF12854.3|2.7e-10,PPR_1|PF12854.3|2e-06,PPR|PF01535.16|7.1e-08,PPR|PF01535.16|6.2e-08,PPR|PF01535.16|5.2e-07,PPR|PF01535.16|6.4e-06,PPR|PF01535.16|7.8e-06,PPR|PF01535.16|2.3e-07,PPR|PF01535.16|0.035,PPR_3|PF13812.2|2e-07,PPR_3|PF13812.2|0.00028,PPR_3|PF13812.2|4e-05,PPR_3|PF13812.2|4.4e-06,PPR_3|PF13812.2|0.00038,PPR_3|PF13812.2|0.0066,PPR_3|PF13812.2|13,MRP-S27|PF10037.5|9.3,MRP-S27|PF10037.5|9.8e-05,MRP-S27|PF10037.5|0.055,MRP-S27|PF10037.5|71,TPR_19|PF14559.2|0.39,TPR_19|PF14559.2|1.1e+02,TPR_19|PF14559.2|98,TPR_19|PF14559.2|5.7,TPR_19|PF14559.2|1e+02 R_Transcript_84010:704-1414(+)
ATGTTGGACAACAACATAGCTCCCCAGGTTGAGACTTTCAACACCATGATTGACATGCACTGTAAACAAGGCAGGGTGGATGAAGCACATGCCATCCTAGAATACATGCTTCAGAGAGGTTACACTCCAAACATAATTACTTGCAATGCTCTCTTGGATGGATATTGCTTGTGTGGCAGAATGGATGAGGCATCTCAGCTAATGGATTTCATGGTGGAAAAAGGTTGCTGGCCTGATGTTGTGACTTTCAACTCCTTGATCAACGGATATTGCAAGGCTAAAAACATTGATGCAGCTCTCACCCGATTCCAAAAAATGGCTCTTGAGGGCGTCTCACCTGATATTTATACCTACAACACTCTCATCGATGGCTTGTGCAAGAGCCATAGACTTGAATCAGCTTTCCAACTTTCCGAGGAAATGAAAGCTCTTGAGCTACATCCAGATGCTGTCACATATGCTTCGTTGCTTTATGGTCTTTGTAAAAATGCACAAGTTGATGAGGCCATATCAATGCTCAAGCAAATGGACAACAATGGAGTGGTCCCTACTATTACCATCTTCAATATCTTAATTGATGGCTTATGTCAAGCAGGAAGACTTGAAGAAGCAGCAAATTTCTTCTCATCCCTCAAAGAAAGGGGTTTAAAACCAAATCAGTACACGTTCAATATAATGATGAGAGGGCTTTGCAAACAAGGGAGATGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_84010.p1 GENE.R_Transcript_84010~~R_Transcript_84010.p1 ORF type:complete len:237 (+),score=48.43,PPR_2|PF13041.2|2.1e-16,PPR_2|PF13041.2|1.8e-11,PPR_2|PF13041.2|1.8e-19,PPR_2|PF13041.2|1.4e-17,PPR_2|PF13041.2|1.7e-13,PPR_2|PF13041.2|1.4e-18,PPR_1|PF12854.3|7e-10,PPR_1|PF12854.3|4.7e-11,PPR_1|PF12854.3|3.8e-12,PPR_1|PF12854.3|5e-14,PPR_1|PF12854.3|4.1e-10,PPR_1|PF12854.3|2.7e-10,PPR_1|PF12854.3|2e-06,PPR|PF01535.16|7.1e-08,PPR|PF01535.16|6.2e-08,PPR|PF01535.16|5.2e-07,PPR|PF01535.16|6.4e-06,PPR|PF01535.16|7.8e-06,PPR|PF01535.16|2.3e-07,PPR|PF01535.16|0.035,PPR_3|PF13812.2|2e-07,PPR_3|PF13812.2|0.00028,PPR_3|PF13812.2|4e-05,PPR_3|PF13812.2|4.4e-06,PPR_3|PF13812.2|0.00038,PPR_3|PF13812.2|0.0066,PPR_3|PF13812.2|13,MRP-S27|PF10037.5|9.3,MRP-S27|PF10037.5|9.8e-05,MRP-S27|PF10037.5|0.055,MRP-S27|PF10037.5|71,TPR_19|PF14559.2|0.39,TPR_19|PF14559.2|1.1e+02,TPR_19|PF14559.2|98,TPR_19|PF14559.2|5.7,TPR_19|PF14559.2|1e+02 R_Transcript_84010:704-1414(+)
MLDNNIAPQVETFNTMIDMHCKQGRVDEAHAILEYMLQRGYTPNIITCNALLDGYCLCGRMDEASQLMDFMVEKGCWPDVVTFNSLINGYCKAKNIDAALTRFQKMALEGVSPDIYTYNTLIDGLCKSHRLESAFQLSEEMKALELHPDAVTYASLLYGLCKNAQVDEAISMLKQMDNNGVVPTITIFNILIDGLCQAGRLEEAANFFSSLKERGLKPNQYTFNIMMRGLCKQGRC*

Click here to download the sequence:
Link to NCBI Protein BLAST