Transcript Information: R_Transcript_84012.p1


Annotated TAIR IDAT5G48670.1
Annotated Gene NameAGAMOUS-like 80
Annotated Gene Symbol(s)FEM111, AGL80
Annotation TypeOrtholog
Chromosome Positionchr5:19738825-19739790 | Reverse length=321
E-Value4.1E-55
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.41249629276201
Replicate 20.11862316619377
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.12633266576941
Replicate 30
Condition 3: 24 Hour
Replicate 10.12970512558025
Replicate 20
Replicate 30.24731869702709


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_84012.p1 GENE.R_Transcript_84012~~R_Transcript_84012.p1 ORF type:complete len:177 (-),score=49.46,SRF-TF|PF00319.14|1.8e-15 R_Transcript_84012:1700-2230(-)
ATGACTAGAAACAAGGTGAAGCTTGAGTTCATACCCAATGACTCTGCAAGAAAGGCAACTTACAAGAAGAGAAAGAAGGGTCTTTTGAAGAAGTTGGAAGAGCTTACCACCCTATGTGAGGTGGATGCTTGTGCTATCTTATACAGCTCCTATGAGAATCGACCACAGGTTTGGCCTAGCCTATCAGGAGCTCGACAAGTTGTGTCGAGGTTTCTGAGCCTGCCTCAGGAAGACCAGGGGAAGAAGATGCTGGACCAGGAGGCTTATCTGAGGCAAAGGATCAGCAAGGGTCGTCAACTGTTGGAGAAACTCCAGAAAGAAAATCGAGCAATGGAGATGACCAATCTTATGCATAATTGCCTTAGTGGTAAGACTCTTGAGGGGCTCAACTTGAATGATACCATGGATTTGTGTTTGGCAGTTGATAAGTCCTTGGAGACCATTCGTAAGAGGATTGCTTACCTTGAGGGTAAGGGTGAGGGTAAAGGGGCAAATAGTCCTCTTCCAATTTCTAGTGATGCATCTGCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_84012.p1 GENE.R_Transcript_84012~~R_Transcript_84012.p1 ORF type:complete len:177 (-),score=49.46,SRF-TF|PF00319.14|1.8e-15 R_Transcript_84012:1700-2230(-)
MTRNKVKLEFIPNDSARKATYKKRKKGLLKKLEELTTLCEVDACAILYSSYENRPQVWPSLSGARQVVSRFLSLPQEDQGKKMLDQEAYLRQRISKGRQLLEKLQKENRAMEMTNLMHNCLSGKTLEGLNLNDTMDLCLAVDKSLETIRKRIAYLEGKGEGKGANSPLPISSDASA*

Click here to download the sequence:
Link to NCBI Protein BLAST