Transcript Information: R_Transcript_84065.p1


Annotated TAIR IDAT5G65490.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SGT1 (InterPro:IPR010770); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:26178003-26180309 | Reverse length=643
E-Value1.9E-284
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 119.147439898901
Replicate 214.276198139106
Replicate 315.294544551183
Condition 2: 8 Hour
Replicate 116.49889827992
Replicate 220.614472999071
Replicate 321.904240687389
Condition 3: 24 Hour
Replicate 119.547535709959
Replicate 216.820090241206
Replicate 319.373802923471


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_84065.p1 GENE.R_Transcript_84065~~R_Transcript_84065.p1 ORF type:complete len:653 (+),score=159.31,SGT1|PF07093.7|7e-192 R_Transcript_84065:240-2198(+)
ATGGCGGAAAATTACCAAGTAGATCCAGACGATCCATTCTTCGGCAAGCACTCAAGACTCCCAGACGACACCGTTTTCTACACCATCTACTCCGGCTGTTCTCTCTCCACCGCCACAAAAACGACCGAACAACAGCTCCAGTCTCTCCACCTCGAAATCCTCAAGACTCTCTCTCCTCTAACCTCCGATTACATATGGCAACACGAACCCTTCTCTCTCTCCCTCTCTTCTTCCGACCAAATCCCTCACCTTCACGGCAAGGTCAAGTTCGGCGACAACCTCGACGACGAATGGTTTGTCGTTTTCCTCCTCTTTCACCTCTCTCTCTCCTTCCCTTCTCTCTCTATCCGTGTTTGGGATACTGATGGTGAGTTCCTTCTCATTGAAGCCGCCTTTCATCTGCCACGTTGGCTCAACCCTGAGAATTCTACCAATCGTGTTTTTATCCGGCAGAACGAGGTTCATATTATTCCTAGAAAGCAGTTTCCTTCCACTCCTGCTTTGAAAGATGCTCTCAAGTTTTTGATTGAGCATCCTGAGATTACTAGGGCTTCGGATTCCGTTCAATACGCTGTTAAGGGTCGCCTTTCTGATTATCCTCAGCGCGCCACCCGGAATGTTCGCCGTGTTCGGGTTCGAGTTCCTCTTTCTGTTGCTCAGGTGTTGAGGCATGAACCCTGCCTGATTTCCTTGGCAGTTGAGGGATTCTATGATCGAGATATTGATACGATGAAATTTGCTGCTAAGATGGAGAAGTTTTTGCCCAAGGGAACTGGGGAGGATCTGGTTTTGGTGTCTGTGAAGATGTCTAGGGCAATGTATGCTCAGTTGTTGCAGCAGAAGTTTCAGGCGCCTAAATGTTATCCAATGCCGCCTATGCCACCAAGGACTGATCAGTGTACTTATATGGAGGCTGAGCTCGGTATGAAGATTGCTTGTGGGTTTGAGATGATGTATCAACAGCGGAAGAGGGAGGGGGAGGAAGGGAAGGGGAGTACTTGGGAGGCGTTTAAGGAGACCTTAGAGAAGAGTGGGTATTTTCAAGGGCAGCTTCCAGGGTCTAAAGAGTATAAGAGGTTGATGGAGAATGCTGAGGAATATTACAGGAAGAGTACCTTGCATCACAGGGTCAGTGAAATGTTAGGTACTCCTGTGGCGCGTATTGATGAGCTTCTTGCTTTACCATATTCACTGGATGATTTTAAAAGTGAAGAAGTTCCTCCATCGGATGATGACTCCTGGCTTTATGGTGGGGAGGAAGAGTTGAACTCTGTTCTTGCAGAGAGACAAAGGGAGATGGAGCTCTTTGAACAGCAACATAAAGGGAAACAGAAAGGAAAGGATAAGGTTGTTGATAATGATTCATCCAACCTAAGTAAGAATGATTTTGATTTAGGAGATATAGCAAAATCTATGAAGTCGTTTGTTCATAAAGTATCGAGTTATCAAGGAGCAGAGGTCCCTGAGAACAGGGACCTGAAAGATGTGGAGTTTGACATGGAGCGTTTTATGAAAGAGTTGGAATCAGTAGCCAGGCCTCGAGCCAGCAGAGATGATGAAAGTGATGTTGATGCTGAGGAAGGATCTTCTTCGGATATGGATTTTGATGAGTTTGATGATGAGAGTGATATTGAGGAAGAACCAGAAGAGTGTAGTGAAAATAAGCGGGAAGATTTTATGCATGCTTATTCAGACATCTTAAACGAAGAATTGAGGAGCACCACTCTGAAGAAGAGTTTTGTGCGGGCTAATGATGAAACTCCAAAGAAAAACGAGGGCATATCAAATGCAACAGAAGACATGGATGAAGAGTTTACCCCAGTAGATGTAGATATCAACTTGGTGAAGAGCTTGCTGGATTCATTTTCTTCTCAGCAAGGCCTTCCAGGTCCTGCTTCCAACTTACTCGGTCTTCTGGGCAAGCAGCTCCCACAAGATGATGCTAGCAAAGGCAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_84065.p1 GENE.R_Transcript_84065~~R_Transcript_84065.p1 ORF type:complete len:653 (+),score=159.31,SGT1|PF07093.7|7e-192 R_Transcript_84065:240-2198(+)
MAENYQVDPDDPFFGKHSRLPDDTVFYTIYSGCSLSTATKTTEQQLQSLHLEILKTLSPLTSDYIWQHEPFSLSLSSSDQIPHLHGKVKFGDNLDDEWFVVFLLFHLSLSFPSLSIRVWDTDGEFLLIEAAFHLPRWLNPENSTNRVFIRQNEVHIIPRKQFPSTPALKDALKFLIEHPEITRASDSVQYAVKGRLSDYPQRATRNVRRVRVRVPLSVAQVLRHEPCLISLAVEGFYDRDIDTMKFAAKMEKFLPKGTGEDLVLVSVKMSRAMYAQLLQQKFQAPKCYPMPPMPPRTDQCTYMEAELGMKIACGFEMMYQQRKREGEEGKGSTWEAFKETLEKSGYFQGQLPGSKEYKRLMENAEEYYRKSTLHHRVSEMLGTPVARIDELLALPYSLDDFKSEEVPPSDDDSWLYGGEEELNSVLAERQREMELFEQQHKGKQKGKDKVVDNDSSNLSKNDFDLGDIAKSMKSFVHKVSSYQGAEVPENRDLKDVEFDMERFMKELESVARPRASRDDESDVDAEEGSSSDMDFDEFDDESDIEEEPEECSENKREDFMHAYSDILNEELRSTTLKKSFVRANDETPKKNEGISNATEDMDEEFTPVDVDINLVKSLLDSFSSQQGLPGPASNLLGLLGKQLPQDDASKGK*

Click here to download the sequence:
Link to NCBI Protein BLAST