Transcript Information: R_Transcript_84106.p1


Annotated TAIR IDAT1G56180.1
Annotated Gene Nameunknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G27290.1); Has 436 Blast hits to 436 proteins in 83 species: Archae - 0; Bacteria - 153; Metazoa - 0; Fungi - 0; Plants - 160; Viruses - 0; Other Eukaryotes - 123 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:21026243-21028047 | Reverse length=389
E-Value1.1E-150
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.7392006591943
Replicate 23.1845288549141
Replicate 34.7108971920108
Condition 2: 8 Hour
Replicate 14.2173597724047
Replicate 23.6214281645108
Replicate 35.6461308099404
Condition 3: 24 Hour
Replicate 14.2492599496008
Replicate 23.7987206829529
Replicate 34.44506084901


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_84106.p1 GENE.R_Transcript_84106~~R_Transcript_84106.p1 ORF type:5prime_partial len:389 (+),score=70.09 R_Transcript_84106:1-1167(+)
CACGTTTGTTTTATATACTTGTTTTTTTTCTTTTGTTTTTTACAATTTAGTCGTTTGTGTTGCCTAGCTCTCATATCAAACCTTCACTTTCCCCCTGCCATGGCACTCTCCTTCCTGCCTGCACACCTCTCAGGTACCCCTTTATATCTCTCCCCGAAGTCTCTCACTTGCCCATATGGGCAGATTAAATTGACCAATACAACCCGGCATACATATTTGGTTCGAGCTGTTAGAGAGTGGAAAGAATATGAAGAAGCAGTGAAAGACAAGGACCTTGCCAGAGCGCTCAGGTTCTTGAAGACAATTAATGGTGATGGGGTTCAAGTTCAACCCACTGAGTCAACTCGTTCTGATTTGGGGTTGCCTTTTTTGGGGAGAGATTGGGAGGTTCTTGATACTTGTTTGAATGCCAATGATATGAGGCTTGTGGGCAGTGCTTATGCCTTTCTTAAGGATAGAGGGTTGTTGCCTAATTTTGGCAAGTATAGAAATATTGTTTTGGAAGGACCACGAGATGTCACGCCTACAATCTTGAAGTCTTCAACTGGCTTGGAAGTGTCTAAACTTTCGCCAAAGAAGTGGGGTGTTTCTGGAACTTCCAGTGCTGTTTTGTTTGCCTTTCTTGGTGGTGTATCATTTCTGCTATCCCAAGGAATTGATTTGAGGCCCAATCTAGCTGCTATATTGGGGTTAGCCATAGCAGATTCTATTTTTCTTGGTGGCTCCTGTCTAGCCCAAATTTCCAGTTATTGGCCTCCATATAGGCGTCGCATCCTTGTTCATGAGGCAGGGCATCTTTTGGCAGCATACTTGATGGGTTGCCCAGTTCGTGGAGTAATTTTAGACCCATTTGTGGCCTTACAGATGGGCATTCAAGGGCAGGCAGGGACCCAATTTTGGGATGAGAACTTGGAGAATGAGCTAACCGGAGGACGGCTGAGCAGTACTGCTTTTGACAGGTACTGCATGATACTTTTTGCTGGTATTGCCGCTGAAGCTCTTGTATATGGTGAAGCAGAGGGCGGTGAAAATGATGAGAATCTGTTTAGGAGCATTTGTGTGCTTCTGCAACCTCCTCTTTCTGTTCCACAGATTTGGAAAGGTCTTTGCATCTTGAGCGTCTACCAGAACCAAACTATTCTGTTTCTGACAAGCCTGAAGGGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_84106.p1 GENE.R_Transcript_84106~~R_Transcript_84106.p1 ORF type:5prime_partial len:389 (+),score=70.09 R_Transcript_84106:1-1167(+)
HVCFIYLFFFFCFLQFSRLCCLALISNLHFPPAMALSFLPAHLSGTPLYLSPKSLTCPYGQIKLTNTTRHTYLVRAVREWKEYEEAVKDKDLARALRFLKTINGDGVQVQPTESTRSDLGLPFLGRDWEVLDTCLNANDMRLVGSAYAFLKDRGLLPNFGKYRNIVLEGPRDVTPTILKSSTGLEVSKLSPKKWGVSGTSSAVLFAFLGGVSFLLSQGIDLRPNLAAILGLAIADSIFLGGSCLAQISSYWPPYRRRILVHEAGHLLAAYLMGCPVRGVILDPFVALQMGIQGQAGTQFWDENLENELTGGRLSSTAFDRYCMILFAGIAAEALVYGEAEGGENDENLFRSICVLLQPPLSVPQIWKGLCILSVYQNQTILFLTSLKG*

Click here to download the sequence:
Link to NCBI Protein BLAST