Transcript Information: R_Transcript_84132.p1


Annotated TAIR IDAT5G25930.1
Annotated Gene NameProtein kinase family protein with leucine-rich repeat domain
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:9050880-9053978 | Forward length=1005
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.3984855656849
Replicate 20.60586339509716
Replicate 30.88891817537308
Condition 2: 8 Hour
Replicate 11.5592988623121
Replicate 22.9592012784853
Replicate 33.4316477789786
Condition 3: 24 Hour
Replicate 11.9417050889103
Replicate 21.4703505927051
Replicate 31.1978345848551


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_84132.p1 GENE.R_Transcript_84132~~R_Transcript_84132.p1 ORF type:5prime_partial len:1005 (+),score=172.34,Pkinase|PF00069.21|2.5e-48,Pkinase_Tyr|PF07714.13|8.4e-40,LRR_8|PF13855.2|0.00019,LRR_8|PF13855.2|8.7e-07,LRR_8|PF13855.2|2.2e-06,LRR_8|PF13855.2|5.4e-05,LRR_8|PF13855.2|1.7e+02,LRR_8|PF13855.2|0.052,LRR_8|PF13855.2|0.1,LRR_8|PF13855.2|1.1e-06,LRR_4|PF12799.3|0.00023,LRR_4|PF12799.3|0.0019,LRR_4|PF12799.3|65,LRR_4|PF12799.3|0.062,LRR_4|PF12799.3|0.00026,LRR_4|PF12799.3|0.00072,LRR_4|PF12799.3|0.00093,LRR_4|PF12799.3|8.2e+02,LRR_4|PF12799.3|20,LRR_4|PF12799.3|5.7e+02,LRR_4|PF12799.3|20,LRR_4|PF12799.3|0.026,LRR_4|PF12799.3|0.025,LRR_1|PF00560.29|5.7,LRR_1|PF00560.29|23,LRR_1|PF00560.29|0.11,LRR_1|PF00560.29|2.9e+03,LRR_1|PF00560.29|2.4e+03,LRR_1|PF00560.29|0.63,LRR_1|PF00560.29|74,LRR_1|PF00560.29|20,LRR_1|PF00560.29|0.026,LRR_1|PF00560.29|1e+04,LRR_1|PF00560.29|4.1e+02,LRR_1|PF00560.29|8.2e+03,LRR_1|PF00560.29|1.1e+03,LRR_1|PF00560.29|1.5e+03,LRR_1|PF00560.29|2.4e+02,LRR_1|PF00560.29|0.27,LRR_1|PF00560.29|6.9e+02 R_Transcript_84132:2-3016(+)
CTATCTTCCCTCAAATATGCCCTTCTTTGTATATCCCTCCTCTTCAACTTGCTACCCCTTTTGGTCATTTCACAACCTCCCGCCTCAGAGCAGCAAATTCTGTTGGACATGAAGAAGTTTTGGGGCAACCAACCCCCTACACAAGCATGGGGTTCCTCTTCCACCGCCAACGCCACCAACTCGCCTTGCGGTTGGCCCGGTATCCAATGCTCCTCCGGTGGCGATACCATCACCGGAGTATTGCTTGGGGGCCAAAACATTCAAGGGAATGTCCCACCATTCATTTGTGATCTCAAGAATCTCACCACTCTTGATCTTAGTGACAACTATATAGGAGGAGAGTTTCCTACTTTCTTATACAATTGTTCTAACCTCCAAACACTAAACTTATCCCAAAACTTGTTTGTTGGGAACCTTCCAAATGACATAAATAAACTATCTCCTCAACTCCAAATCCTTGATCTTAGTGGCAACAACTTCACTGGTGATATCCCAAGCTCAATAGTAGAACTCAAAGAGTTGACCACATTGAACTTAGTATCAAATCTCTTCAATGGAACTTTTCCTTCTGAGTTGGGATATTTGGTCAACCTTGAGAATTTGTTCTTGGCTTATAATCCATTTTCTCCTTTGGAATTGCCCCCAGAATTTGGGATGCTTAAGAGCTTGAAGTTCCTTTGGATGAGTCAATGTAATTTGATTGGTAAAATCCCACAAAGTTTTGGTAATTTATCTAGCCTTGAGCACTTAGACTTGGTGGGTAATGCTTTGGTGGGTGATATACCAAGTGGGTTGTTCTTGCTTAAGAATTTGACCTTCTTATACTTGTATCATAACAAGCTTACAGGTGAGCTTCCAACCTCCAGTGAAGCCTTGAGTTTGAAGGAACTGGATCTCTCAAACAACAATTTGACTGGAAGAATCCCTGATGGGATTGGAAAGTTGCCAAGATTGGAGAAGTTAATTTTGTTTAGTAACAACTTTTATGGGGTGTTACCAACAAATATAGGCCTTATTCCTACATTGAAGGTATTGAGGCTATGGAGGAACAGGTTCACTGGTCCTCTGCCCCCGGAATTAGGCCTCCACTCGAAGCTCGAGGCCTTCGAGGTTCCTGAAAATGGATTCACCGGTAGCTTGCCGGAACATCTCTGTGCTGGTAAGACCTTGTTTGGTTTGGTCGCATTCAACAACAAGCTCAATGGGTCAATACCAAGTTCTTTGGGTCAATGCCATTCTTTGCTCACAATTCATGTCTACAACAACAGCTTTTCAGGGGAAGTCCCTCAAGGGATATGGACTTTGAGGAACATTTCGACATTGACATTGAGTGATAATCAATTCTCCGGCCAGTTACCGGAGAATTTGGCTTGGAACATGACTCGAGTTGAGATGAATAACAACAAATTTACAGGGGAAATTCCACCAAGTTCTGGAACTTGGAAGAGTTTGGTGGTTTTTGAGGCTAGTAATAATATGTTGTCAGGTACTATTCCATTGGAGATCACTAGCCTTTCGCGCCTTAACACTCTCCTTCTTAATGGAAATCAACTCTCAGGTGAGCTTCCCTCTCAAATCAATTCATGGCAAAGCTTGAATAACTTGAACCTTGCAGGGAACGAGCTTTCTGGCTCGATCCCTCCTGTTCTTGGCTCACTGCCTGTGCTTAATTATCTTGATTTGTCGAATAATAAGTTGACTGGCAAAATCCCTCCTGAATTAAGCCATCTAAAGATCACTTCTCTTAACCTTTCTTCTAACAACACCAACTTATGTTCTGATGGTGGAGTGTCAAACCTTCCTAAATGCTCGCTTTATCAACAAAATTCCAAGAGCTTGTCCTCCAAATATCTTGCTTTGATCCTAGTCCTTGCAATAGTAGCCTTCATAGCAACTATGTACTTCTCTTGGTTCATGATCAAGGAATTCCGGCAAAGGAAACATAGCCATGATCTTACAACATGGAAATTGACCTCATTCCATAAGGTAGACTTCACAGAAGAGAAAATCCTTGTAAACCTGGATGAAAGCCATATGATAGGATCAGGGGGTTCCGGAAAAGTTTACTGCATACCCACAAACCGGTCAGGAGATGTTGTCGCGGTTAAGAGGATATGGAACAACAAGAAAATGAACAATACATTAGAGAAGGAGTTCCTAGCTGAGGTTCAAATTCTGGGTACAATCAGACATTTGAACATAGTCAAGTTACTTTGCTGCATTTCGAGTGAGGACTCGAAACTCCTAGTTTATGAGTACATGGAGAATCAGAGCCTCGATAAGTGGATCCATTCAGGGAAAAAGAGACCTGTTTCTTCATCTATGAATGGGTCTGTTCTTGATTGGCCTGCAAGATTGAGGATTGCTGTTGGGGCTGCTCAAGGGTTAAGCTACATGCACCATGACTGTTCACCACCTATTATTCACAGGGATGTGAAATCCAGTAATATATTGCTGGATTCCGAGTTCAATGCTAAGATTGCGGATTTTGGACTCGCAAAAATTTTAGCTAAACGTGGAGGTCAGCCTCACACAGTTTCTGCTGTCGCTGGCTCTTTCGGTTACATGGCCCCAGAATATTGCTACACAACCAAGGTGAATGAGAAGATCGACATCTATAGTTTCGGGGTGGTGCTCCTCGAACTGGTAACAGGAAAAGAGCCTCAGACAGGAGATGAGTACAGGAACCTAGCAGAGTGGGCGTGGAGGCATTACAGCGAGGGACATCCAATTTCTGATATTCTCGATGAAGAAGTGAAGGAGCCTTGTTACTTGGATGAGATGATCAAAGTATTCAAGATAGGGTTGATGTGTACCAACACAGTGGCTTCTTCTAGGCCGACAATGAAGGAGGTTTTGCAGGTGCTTCGACAGTGTAATGTTCTAGAGAGTTCTGGAAGAAGAAAGCTTGCAAAAGACCAAGATGTTACCCCTCTTCTTGGTGGTGGGAGCTATCTGTCTAGCTGTAAGAATAGCAGAAAAGCAGTGGAGGAAGATGTCTATAGCATGGTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_84132.p1 GENE.R_Transcript_84132~~R_Transcript_84132.p1 ORF type:5prime_partial len:1005 (+),score=172.34,Pkinase|PF00069.21|2.5e-48,Pkinase_Tyr|PF07714.13|8.4e-40,LRR_8|PF13855.2|0.00019,LRR_8|PF13855.2|8.7e-07,LRR_8|PF13855.2|2.2e-06,LRR_8|PF13855.2|5.4e-05,LRR_8|PF13855.2|1.7e+02,LRR_8|PF13855.2|0.052,LRR_8|PF13855.2|0.1,LRR_8|PF13855.2|1.1e-06,LRR_4|PF12799.3|0.00023,LRR_4|PF12799.3|0.0019,LRR_4|PF12799.3|65,LRR_4|PF12799.3|0.062,LRR_4|PF12799.3|0.00026,LRR_4|PF12799.3|0.00072,LRR_4|PF12799.3|0.00093,LRR_4|PF12799.3|8.2e+02,LRR_4|PF12799.3|20,LRR_4|PF12799.3|5.7e+02,LRR_4|PF12799.3|20,LRR_4|PF12799.3|0.026,LRR_4|PF12799.3|0.025,LRR_1|PF00560.29|5.7,LRR_1|PF00560.29|23,LRR_1|PF00560.29|0.11,LRR_1|PF00560.29|2.9e+03,LRR_1|PF00560.29|2.4e+03,LRR_1|PF00560.29|0.63,LRR_1|PF00560.29|74,LRR_1|PF00560.29|20,LRR_1|PF00560.29|0.026,LRR_1|PF00560.29|1e+04,LRR_1|PF00560.29|4.1e+02,LRR_1|PF00560.29|8.2e+03,LRR_1|PF00560.29|1.1e+03,LRR_1|PF00560.29|1.5e+03,LRR_1|PF00560.29|2.4e+02,LRR_1|PF00560.29|0.27,LRR_1|PF00560.29|6.9e+02 R_Transcript_84132:2-3016(+)
LSSLKYALLCISLLFNLLPLLVISQPPASEQQILLDMKKFWGNQPPTQAWGSSSTANATNSPCGWPGIQCSSGGDTITGVLLGGQNIQGNVPPFICDLKNLTTLDLSDNYIGGEFPTFLYNCSNLQTLNLSQNLFVGNLPNDINKLSPQLQILDLSGNNFTGDIPSSIVELKELTTLNLVSNLFNGTFPSELGYLVNLENLFLAYNPFSPLELPPEFGMLKSLKFLWMSQCNLIGKIPQSFGNLSSLEHLDLVGNALVGDIPSGLFLLKNLTFLYLYHNKLTGELPTSSEALSLKELDLSNNNLTGRIPDGIGKLPRLEKLILFSNNFYGVLPTNIGLIPTLKVLRLWRNRFTGPLPPELGLHSKLEAFEVPENGFTGSLPEHLCAGKTLFGLVAFNNKLNGSIPSSLGQCHSLLTIHVYNNSFSGEVPQGIWTLRNISTLTLSDNQFSGQLPENLAWNMTRVEMNNNKFTGEIPPSSGTWKSLVVFEASNNMLSGTIPLEITSLSRLNTLLLNGNQLSGELPSQINSWQSLNNLNLAGNELSGSIPPVLGSLPVLNYLDLSNNKLTGKIPPELSHLKITSLNLSSNNTNLCSDGGVSNLPKCSLYQQNSKSLSSKYLALILVLAIVAFIATMYFSWFMIKEFRQRKHSHDLTTWKLTSFHKVDFTEEKILVNLDESHMIGSGGSGKVYCIPTNRSGDVVAVKRIWNNKKMNNTLEKEFLAEVQILGTIRHLNIVKLLCCISSEDSKLLVYEYMENQSLDKWIHSGKKRPVSSSMNGSVLDWPARLRIAVGAAQGLSYMHHDCSPPIIHRDVKSSNILLDSEFNAKIADFGLAKILAKRGGQPHTVSAVAGSFGYMAPEYCYTTKVNEKIDIYSFGVVLLELVTGKEPQTGDEYRNLAEWAWRHYSEGHPISDILDEEVKEPCYLDEMIKVFKIGLMCTNTVASSRPTMKEVLQVLRQCNVLESSGRRKLAKDQDVTPLLGGGSYLSSCKNSRKAVEEDVYSMV*

Click here to download the sequence:
Link to NCBI Protein BLAST