Transcript Information: R_Transcript_84133.p1


Annotated TAIR IDAT5G25930.1
Annotated Gene NameProtein kinase family protein with leucine-rich repeat domain
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:9050880-9053978 | Forward length=1005
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6089779489958
Replicate 21.1927379276643
Replicate 30.42627621383633
Condition 2: 8 Hour
Replicate 11.7746856083214
Replicate 22.7814221291191
Replicate 33.0756401932683
Condition 3: 24 Hour
Replicate 11.618963878937
Replicate 20.69125199265277
Replicate 31.3934385941707


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_84133.p1 GENE.R_Transcript_84133~~R_Transcript_84133.p1 ORF type:5prime_partial len:1021 (+),score=182.45,Pkinase|PF00069.21|3e-48,Pkinase_Tyr|PF07714.13|1.8e-39,LRR_8|PF13855.2|0.0002,LRR_8|PF13855.2|8.8e-07,LRR_8|PF13855.2|1.3e-05,LRR_8|PF13855.2|3e-05,LRR_8|PF13855.2|1.8e+02,LRR_8|PF13855.2|0.053,LRR_8|PF13855.2|0.11,LRR_8|PF13855.2|2.3e-07,LRR_4|PF12799.3|0.00024,LRR_4|PF12799.3|0.0019,LRR_4|PF12799.3|66,LRR_4|PF12799.3|0.064,LRR_4|PF12799.3|0.00026,LRR_4|PF12799.3|0.0011,LRR_4|PF12799.3|0.00099,LRR_4|PF12799.3|8.3e+02,LRR_4|PF12799.3|20,LRR_4|PF12799.3|5.8e+02,LRR_4|PF12799.3|20,LRR_4|PF12799.3|0.026,LRR_4|PF12799.3|0.0022,LRR_1|PF00560.29|5.8,LRR_1|PF00560.29|24,LRR_1|PF00560.29|0.11,LRR_1|PF00560.29|2.9e+03,LRR_1|PF00560.29|2.4e+03,LRR_1|PF00560.29|0.64,LRR_1|PF00560.29|75,LRR_1|PF00560.29|3.4,LRR_1|PF00560.29|0.041,LRR_1|PF00560.29|1.1e+04,LRR_1|PF00560.29|4.2e+02,LRR_1|PF00560.29|8.4e+03,LRR_1|PF00560.29|1.1e+03,LRR_1|PF00560.29|1.6e+03,LRR_1|PF00560.29|2.5e+02,LRR_1|PF00560.29|0.27,LRR_1|PF00560.29|5.4,LRRNT_2|PF08263.8|5.2e-06,LRRNT_2|PF08263.8|1.6e+04 R_Transcript_84133:2-3064(+)
CTATCTTCCCTCAAATATGCCCTTCTTTGTATATCCCTCCTCTTCAACTTGCTACCCCTTTTGGTCATTTCACAACCTCCCGCCTCAGAGCAGCAAATTCTGTTGGACATGAAGAAGTTTTGGGGCAACCAACCCCCTACACAAGCATGGGGTTCCTCTACCACCACCTCGCCTTGTGGTTGGCCCGGTATCCAATGCTCCTCCGGTGGCGATACCATCACCGGAGTATTGCTTGGGGGCCAAAACATTCAAGGGAATGTCCCACCATTCATTTGTGATCTCAAGAATCTCACCACTCTTGATCTTAGTGACAACTATATAGGAGGAGAGTTTCCTACTTTCTTATACAATTGTTCTAACCTCCAAACACTAAACTTATCCCAAAACTTGTTTGTTGGGAACCTTCCAAATGACATAAATAAACTATCTCCTCAACTCCAAATCCTTGATCTTAGTGGCAACAACTTCACTGGTGATATCCCAAGCTCAATAGTAGAACTCAAAGAGTTGACCACATTGAACTTAGTATCAAATCTCTTCAATGGAACTTTTCCTTCTGAGTTGGGATATTTGGTCAACCTTGAGAATTTGTTCTTGGCTTATAATCCATTTTCTCCTTTGGAATTGCCCCCAGAATTTGGGATGCTTAAGAGCTTGAAGTTCCTTTGGATGAGTCAATGTAATTTGATTGGTAAAATCCCACAAAGTTTTGGTAATTTATCTAGCCTTGAGCACTTAGACTTGGTGGGTAATGCTTTGGTGGGTGATATACCAAGTGGGTTGTTCTTGCTTAAGAATTTGACCTTCTTATACTTGTATCATAACGAGCTTACAGGTGGGCTTCCAACCTCCATTGAAGCTTTGAGTTTGAAGGAACTTGATCTCTCAAACAACAATTTAACTGGAACAATACCAGATGGGATTGGAAAGTTGCCAAGATTGGAGAAGTTAATTTTGTTTAGTAACAACTTTTATGGGGTGTTACCAACAAATATAGGCCTTATTCCTACATTGAAGGTATTGAGGCTATGGAGGAACAGGTTCACTGGTCCTCTGCCCCCGGAATTAGGCCTCCACTCGAAGCTCGAGGCCTTCGAGGTTCCTGAAAATGGATTCACCGGTAGCTTGCCGGAACATCTCTGTGCTGGTAAGACCTTGTTTGGTTTGGTCGCATTCAACAACAAGCTCAATGGGTCAATACCAAGTTCTTTGGGTCAATGCCATTCTTTGCTCACAATTCATGTCTACAACAACAGCTTTTCAGGGGAAGTCCCTCAAGGGATATGGACTTTGAGGAACATTTCGACATTGACATTGAGTGATAATCAATTCTCCGGCCAGTTACCGGAGAATTTGGCTTGGAACATGACTCGAGTTGAGATGAATAACAACAAATTTACAGGGGAAATTCCACCAAGTTCTGGAACTTGGAAGAGTTTGGTGGTTTTTGAGGCTAGTAATAATATGTTGTCAGGTACTATTCCATTGGAGATCACTAGCCTTTCGCGCCTTAACACTCTCCTTCTTAATGGAAATCAACTCTCAGGTGAGCTTCCCTCTCAAATCAATTCATGGCAAAGCTTGAATAACTTGAACCTTGCAGGGAACGAGCTTTCTGGCTCGATCCCTCCTGTTCTTGGCTCACTGCCTGTGCTTAATTATCTTGATTTGTCGAATAATAAGTTGACTGGCAAAATCCCTCCTGAATTAAGCCATCTAAAGATCACTTCTCTTAACCTTTCTTCTAACAAGCTCACTGGGAGCATCCCTTATGAGTTTGATAATGATGCATATGGAGATAGTTTCTTGAACACCAACTTATGTTCTGATGGTGGAGTGTCGAACCTTCCTAAATGCTTGCTTTATCGACAAAATTCCAAGAGCTTGTCCTCCAAATATCTTGCTTTGATCCTAGTCCTTGCAATAGTAGCCTTCATAGCAACTATGTACTTCTCTTGGTTCATGATCAAGGAATTCCGGCAAAGGAAACATAGCCATGATCTTACAACATGGAAATTGACCTCATTCCATAAGGTAGACTTCACAGAAGAGAAAATCCTTGTAAACCTGGATGAAAGCCATATGATAGGATCAGGGGGTTCCGGAAAAGTTTACTGCATACCCACAAACCGGTCAGGAGATGTTGTCGCGGTTAAGAGGATATGGAACAACAAGAAAATGAACAATACATTAGAGAAGGAGTTCCTAGCTGAGGTTCAAATTCTGGGTACAATCAGACATTTGAACATAGTCAAGTTACTTTGCTGCATTTCGAGTGAGGACTCGAAACTCCTAGTTTATGAGTACATGGAGAATCAGAGCCTCGATAAGTGGATCCATTCAGGGAAAAAGAGACCTGTTTCTTCATCTATGAATGGGTCTGTTCTTGATTGGCCTGCAAGATTGAGGATTGCTGTTGGGGCTGCTCAAGGGTTAAGCTACATGCACCATGACTGTTCACCACCTATTATTCACAGGGATGTGAAATCCAGTAATATATTGCTGGATTCCGAGTTCAATGCTAAGATTGCGGATTTCGGACTTGCAAAAATTTTAGCTAAGCCTGGAGGTCAGCCTCACACAGTTTCTGCTGTCGCTGGCTCTTTCGGTTACATGGCCCCAGAATATTGCTACACAACCAAGGTGAATGAGAAGATCGACATCTATAGTTTCGGGGTGGTGCTCCTCGAACTGGTAACAGGAAAAGAGCCTCAGACAGGAGATGAGTACAGGAACCTAGCAGAGTGGGCATGGAGGCATTACAGTGAGGGACATCCAATTTCTGATATTCTCGATGAAGAAGTGAAGGAGCCTTGTTACTTGGATGAGATGATCAAAGTATTCAAGATAGGGTTGATGTGTACCAACACAGTGGCTTCTTCTAGGCCGACAATGAAGGAGGTTTTGCAGGTGCTTCGACAGTGTAATGTTCTAGAGAGTTCTGGAAGAAGAAAGCTTGCAAAAGACCAAGATGTTACCCCTCTTCTTGGTGGTGGGAGCTATCTGTCTAGCTGTAAGAATAGCAGAAAAGCAGTGGAGGAAGATGTCTATAGCATGGTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_84133.p1 GENE.R_Transcript_84133~~R_Transcript_84133.p1 ORF type:5prime_partial len:1021 (+),score=182.45,Pkinase|PF00069.21|3e-48,Pkinase_Tyr|PF07714.13|1.8e-39,LRR_8|PF13855.2|0.0002,LRR_8|PF13855.2|8.8e-07,LRR_8|PF13855.2|1.3e-05,LRR_8|PF13855.2|3e-05,LRR_8|PF13855.2|1.8e+02,LRR_8|PF13855.2|0.053,LRR_8|PF13855.2|0.11,LRR_8|PF13855.2|2.3e-07,LRR_4|PF12799.3|0.00024,LRR_4|PF12799.3|0.0019,LRR_4|PF12799.3|66,LRR_4|PF12799.3|0.064,LRR_4|PF12799.3|0.00026,LRR_4|PF12799.3|0.0011,LRR_4|PF12799.3|0.00099,LRR_4|PF12799.3|8.3e+02,LRR_4|PF12799.3|20,LRR_4|PF12799.3|5.8e+02,LRR_4|PF12799.3|20,LRR_4|PF12799.3|0.026,LRR_4|PF12799.3|0.0022,LRR_1|PF00560.29|5.8,LRR_1|PF00560.29|24,LRR_1|PF00560.29|0.11,LRR_1|PF00560.29|2.9e+03,LRR_1|PF00560.29|2.4e+03,LRR_1|PF00560.29|0.64,LRR_1|PF00560.29|75,LRR_1|PF00560.29|3.4,LRR_1|PF00560.29|0.041,LRR_1|PF00560.29|1.1e+04,LRR_1|PF00560.29|4.2e+02,LRR_1|PF00560.29|8.4e+03,LRR_1|PF00560.29|1.1e+03,LRR_1|PF00560.29|1.6e+03,LRR_1|PF00560.29|2.5e+02,LRR_1|PF00560.29|0.27,LRR_1|PF00560.29|5.4,LRRNT_2|PF08263.8|5.2e-06,LRRNT_2|PF08263.8|1.6e+04 R_Transcript_84133:2-3064(+)
LSSLKYALLCISLLFNLLPLLVISQPPASEQQILLDMKKFWGNQPPTQAWGSSTTTSPCGWPGIQCSSGGDTITGVLLGGQNIQGNVPPFICDLKNLTTLDLSDNYIGGEFPTFLYNCSNLQTLNLSQNLFVGNLPNDINKLSPQLQILDLSGNNFTGDIPSSIVELKELTTLNLVSNLFNGTFPSELGYLVNLENLFLAYNPFSPLELPPEFGMLKSLKFLWMSQCNLIGKIPQSFGNLSSLEHLDLVGNALVGDIPSGLFLLKNLTFLYLYHNELTGGLPTSIEALSLKELDLSNNNLTGTIPDGIGKLPRLEKLILFSNNFYGVLPTNIGLIPTLKVLRLWRNRFTGPLPPELGLHSKLEAFEVPENGFTGSLPEHLCAGKTLFGLVAFNNKLNGSIPSSLGQCHSLLTIHVYNNSFSGEVPQGIWTLRNISTLTLSDNQFSGQLPENLAWNMTRVEMNNNKFTGEIPPSSGTWKSLVVFEASNNMLSGTIPLEITSLSRLNTLLLNGNQLSGELPSQINSWQSLNNLNLAGNELSGSIPPVLGSLPVLNYLDLSNNKLTGKIPPELSHLKITSLNLSSNKLTGSIPYEFDNDAYGDSFLNTNLCSDGGVSNLPKCLLYRQNSKSLSSKYLALILVLAIVAFIATMYFSWFMIKEFRQRKHSHDLTTWKLTSFHKVDFTEEKILVNLDESHMIGSGGSGKVYCIPTNRSGDVVAVKRIWNNKKMNNTLEKEFLAEVQILGTIRHLNIVKLLCCISSEDSKLLVYEYMENQSLDKWIHSGKKRPVSSSMNGSVLDWPARLRIAVGAAQGLSYMHHDCSPPIIHRDVKSSNILLDSEFNAKIADFGLAKILAKPGGQPHTVSAVAGSFGYMAPEYCYTTKVNEKIDIYSFGVVLLELVTGKEPQTGDEYRNLAEWAWRHYSEGHPISDILDEEVKEPCYLDEMIKVFKIGLMCTNTVASSRPTMKEVLQVLRQCNVLESSGRRKLAKDQDVTPLLGGGSYLSSCKNSRKAVEEDVYSMV*

Click here to download the sequence:
Link to NCBI Protein BLAST