Transcript Information: R_Transcript_84181.p1


Annotated TAIR IDAT3G04090.1
Annotated Gene Namesmall and basic intrinsic protein 1A
Annotated Gene Symbol(s)SIP1;1, SIP1A
Annotation TypeHomolog
Chromosome Positionchr3:1072340-1074031 | Reverse length=240
E-Value5E-51
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 116.057984637379
Replicate 210.298818242171
Replicate 314.860383567124
Condition 2: 8 Hour
Replicate 112.087958644843
Replicate 214.789317420278
Replicate 318.783470483755
Condition 3: 24 Hour
Replicate 112.713975521672
Replicate 29.9109074761455
Replicate 311.567236337696


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_84181.p1 GENE.R_Transcript_84181~~R_Transcript_84181.p1 ORF type:5prime_partial len:316 (+),score=45.82,MIP|PF00230.16|9.6e-15 R_Transcript_84181:1-948(+)
GCCAAAAACAAAAATGAAATCCCAACTTCTTCGCCTTCCTTAGCTGACCCATTCCTTCATCTCCATCTCCAATCTCCATCTCCATCTCCATCTCCAAAATCCGCCAACAAAACAAATCCCAGAAAATTAAAACAACAAACAAAAAACCCCAGAAAACCAAAACAAAATCATCAAATCAAATCAAATCAAATGGGTTCATCAGGATTAGGAGGGGCAATAAAGGCAGGAATTGGAGACGGGATTGTGACGTTTGGATGGGTTTTCTGTTCATCAGCCGTCGGCATCGCCACCTCCCTTGTGGCCACCAATCTTGGGTTGCTGGATGGCCACTGGAATCTCGTGATCCTCACGTGCCTTTTCGTTGTTCTCATGCTTGTTTTTGATTGGATCGCTGTGTTGCTTGGTGGTGCCAGTTATTGCCCCACCGCAAACGCGTCGTTTTATGCTGCTGGTGTTCCTGTTCCTGGCGATTCTCTGCTTTCTATGGCCTTCCGCTTCCCTGCTCAGGCTGCTGGTGCTGTGGCTGGGGCTATAGCAATCTCAGAAGTGATGCCGAGTCAGTACAAACACATGCTAGGAATACCTTCAATTAAAGTGGACTTGCATACTGCGGCCATAGCTGAAGGTGTATTGACGTTTCTTATAAGCTTGGCTGTTCTCATCATAATGCTCAGGATTCGGGGAAGCACATTGATAAAGACATGGTTGCTTGCCATGACTACCGTGACTTTGGTTGTTAATGGTTCTGGTTATACCGGACCTTCAATGAATCCTGCTAATGCATTTGGATGGGCATATGTAAACAATTGGCATAACACATGGGATCAGTTTTATGTATATTGGATCTGCCCCTTTATAGGTGCAATCATGGCTGCTTGGGTGTTTCGACTCATCTTCCCTCAACCGAAAAAGCAGAAGAGAGCCCCAAAGAGAAGGAAAGTAGATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_84181.p1 GENE.R_Transcript_84181~~R_Transcript_84181.p1 ORF type:5prime_partial len:316 (+),score=45.82,MIP|PF00230.16|9.6e-15 R_Transcript_84181:1-948(+)
AKNKNEIPTSSPSLADPFLHLHLQSPSPSPSPKSANKTNPRKLKQQTKNPRKPKQNHQIKSNQMGSSGLGGAIKAGIGDGIVTFGWVFCSSAVGIATSLVATNLGLLDGHWNLVILTCLFVVLMLVFDWIAVLLGGASYCPTANASFYAAGVPVPGDSLLSMAFRFPAQAAGAVAGAIAISEVMPSQYKHMLGIPSIKVDLHTAAIAEGVLTFLISLAVLIIMLRIRGSTLIKTWLLAMTTVTLVVNGSGYTGPSMNPANAFGWAYVNNWHNTWDQFYVYWICPFIGAIMAAWVFRLIFPQPKKQKRAPKRRKVD*

Click here to download the sequence:
Link to NCBI Protein BLAST