Transcript Information: R_Transcript_84245.p1


Annotated TAIR IDAT1G27880.1
Annotated Gene NameDEAD/DEAH box RNA helicase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:9708940-9713901 | Forward length=911
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.3842197392673
Replicate 21.1015189725895
Replicate 31.6186773890215
Condition 2: 8 Hour
Replicate 11.7564806760872
Replicate 21.0294624402259
Replicate 31.8851244434449
Condition 3: 24 Hour
Replicate 13.4166329814249
Replicate 22.5266731277214
Replicate 33.4682872523135


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_84245.p1 GENE.R_Transcript_84245~~R_Transcript_84245.p1 ORF type:complete len:934 (+),score=188.58,Helicase_C|PF00271.27|1.2e+04,Helicase_C|PF00271.27|2.9e-19,DEAD|PF00270.25|7.1e-19 R_Transcript_84245:84-2885(+)
ATGGAATCAGATAGTGATTCAGATGGCTCTCATGTCTCCAACACCCCCCCAAGAAATCCAACACCTCCACCCCGAAAACCCATCTCAATTCCCAAACTTAAACAACCTCCTTCACATTCAAAACCAATCTCAAATAAACCCCCTCCAAAATCCTCAAAATCCGCAAAAACCCCACAAAACCCTCCTCAAAATCCAAACACTCTACACCCACCTTCTAATTCCACCATCCTTCCTTTTTTTTCCCTCCCAATTAAACGACCCATTTCCTCAAACCCTTCAATTTCAGGCCCCAATTCAATTAGGGCTGGTTTCTGTTCCTTCTCAAAGTCTAATTCCTTCTCAAAATTCCAGAAAAATGTTCTTAGCTTTGATGATTGTGAGAAAGATACAATTTTGCCATCTGGGTCTATGTCAAAACCAGATTTTGAGGTCAATACTGATGATGGGGTTGTTCTAAGCTCAGATAATAATTTGAAAAAAAGGGCTGTTAGGAAACCCTCTAATTTGATTGGATGTGGGTCTAGTTCTGGTTTCTTGCATGTTAAAAAACCCCCAAAAAATGAAGGGAATTTTGTTAAATTAAACATTAATGGGCATGGTAGGAGGTTCTCATTTAAGAGTAGGAAAAAGAATTGTAGCTCATCATCCTCTAGAAGAAGTTATAGAAGGTTTAAGGGGAGGGTAAAAGCAAATAATGGGGTTGAAAATAACAAACATGATGAGGAAGATGGGTTAGTTTTAGAAACTAGTGAAAGGCAGGAAAAGGGTAAAATGTCAAAAGATAAGGTTGATTTGATAAGCAATGCTGTTTCAGATGTTAGGAGTGAGGCATCGGATGAAAATTTGTTGAAATTGTTGAAACTTACACATGGGTATGATTTGTTTCGGGACGGGCAGTTGGAGGCTGTTAAGATGGTACTTGCTGGAAAAAATACTATGTTGGTTTTGCCTACTGGGGCTGGCAAGTCACTGTGTTATCAGTTGCCTGCCATTGTTTTTCCAGGGGTTACACTTGTTGTAAGCCCGTTAATGGCGTTGATGATTGATCAATTAAAACAGCTACCTTCTTTTGTGGATGGTGCTTTCTTGAGCAGTAGTCAGTCACTAGAGGAGATGTCTGAGACTCTAACTCTACTTCAAGAAGGAAGCATTAAGGTGCTTTTCGTTTCACCAGAGAGGTTTCTAAATGCAGAGTTCATGTCAATAATATCTTCTATCTCATTAATATCGCTGGTAGTGATTGATGAAGCTCACTGTGTATCTGAATGGTCACACAATTTTCGGCCTTCATATATGAGGCTAAGGGCATCTCTACTTCGTGATAAACTCAACGTTCAATGTATTCTTGCTATGACTGCAACGGCAACTAGGAAAACCTTGGACGCCATTATGCATGCTTTGGACATCCCCTCAAGTAATTTGGTGCAGACTGTTCAGTTGAGAAACAATTTGCAGCTGTCTGTGTCTTCAAGCGGATATAACAAGATGAAGGACTTGATCACCTTGATGAAATCATCTCCATATTCTGAAGTTAAGAGCATCATTATTTATTGTAAATTTCAGTCCGAGACTGATATGATAAGCAAATATCTATGTGATAACAATATTCCTGCAATGAGCTATCACAGCGGTATGCTGACAAAGGATCGTAGTCGTGTCCAAGCAATGTTTTGCTCCAACAAAATTAGAGTGGTTGTTGCTACTGTGGCATTTGGAATGGGGCTTGACAAAAGTGATGTTGGAGCTGTCATCCATTACAGCTTGCCTGAAAGCTTGGAAGAGTATGTTCAGGAGATTGGACGTGCTGGACGGGATGGGAGGTTATCATTTTGCCACCTCCTCTTTGATGATGCCATTTATTTCAAACTACGCAGTCTTGCATACAGTGATGGTGTTGATGAATACGCAGTGAATAAGCTCATTGGTCAAGTTTTTAGCAATGAGGTGGGACTGAAGGGGGAAATTTGTTCATTGGTCAAAGAACCTGCATCTCGCAGATTTGACATCAAAGAAGAGGTGATTTTAACAATCTTAACACAGTTGGAGTTGGGTGAAGTGCAATATCTGCGTCTTCTTCCACAGATGAATGTCACTTGCAGCTTAAACTTTCACAAGACTCCTCCTATGGAGCTAGCTGCCAGGGATGCTGTTGTTGCAGGAATTTTGAACAAGTCTGAAACAAGACATGGGGTGCATGTTTTTGACATTCCCACTGTTGCAAATGCTATTGGTATTACAGCAACGGACTTAGTAAATCAGCTGCAGAACCTGAAGTTTACGGGGGAAATAACATATGAATTGAAGGATCCAGCATATTGCTATGTCATTGTGAATGTCCCTGGAGACTTGTGCTCCCTAGCTGCCAAGATCACAAAATGGTTGTCAGAAATTGAATGTTGTAAGGTCTGGAAATTAGATGCAATTTTTCATGCTGCAACCTTCGCTGAAAAATCATGTGAACGGATGAATGGCTGTGAAGGTGCTCAACATACGACATGTTTGCAGAAGAAGATTTCGTATTATTTCAGTGAAGAAGATCAAAAGGATTTTCCCTCTAGGATGAACCAAAACAGCCCATTTTTGCGAGCAGATATAAAGGTCTTTGTGCAAAGTAACTCTGGAGCAAAATTCACACCGCGTGCTGTAGCAAGAATAATGCATGGCATTGCTAGCCCAGCTTATCCTTCTGCAACCTGGTCAAAGACTCATTTCTGGGGCAGGTATTCACATGTGGATTTTAAAGCAGTCATGGAGGCCGCAAAAGCTGAGCTCATGAATTTTGTTGGAAAGGATACAGCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_84245.p1 GENE.R_Transcript_84245~~R_Transcript_84245.p1 ORF type:complete len:934 (+),score=188.58,Helicase_C|PF00271.27|1.2e+04,Helicase_C|PF00271.27|2.9e-19,DEAD|PF00270.25|7.1e-19 R_Transcript_84245:84-2885(+)
MESDSDSDGSHVSNTPPRNPTPPPRKPISIPKLKQPPSHSKPISNKPPPKSSKSAKTPQNPPQNPNTLHPPSNSTILPFFSLPIKRPISSNPSISGPNSIRAGFCSFSKSNSFSKFQKNVLSFDDCEKDTILPSGSMSKPDFEVNTDDGVVLSSDNNLKKRAVRKPSNLIGCGSSSGFLHVKKPPKNEGNFVKLNINGHGRRFSFKSRKKNCSSSSSRRSYRRFKGRVKANNGVENNKHDEEDGLVLETSERQEKGKMSKDKVDLISNAVSDVRSEASDENLLKLLKLTHGYDLFRDGQLEAVKMVLAGKNTMLVLPTGAGKSLCYQLPAIVFPGVTLVVSPLMALMIDQLKQLPSFVDGAFLSSSQSLEEMSETLTLLQEGSIKVLFVSPERFLNAEFMSIISSISLISLVVIDEAHCVSEWSHNFRPSYMRLRASLLRDKLNVQCILAMTATATRKTLDAIMHALDIPSSNLVQTVQLRNNLQLSVSSSGYNKMKDLITLMKSSPYSEVKSIIIYCKFQSETDMISKYLCDNNIPAMSYHSGMLTKDRSRVQAMFCSNKIRVVVATVAFGMGLDKSDVGAVIHYSLPESLEEYVQEIGRAGRDGRLSFCHLLFDDAIYFKLRSLAYSDGVDEYAVNKLIGQVFSNEVGLKGEICSLVKEPASRRFDIKEEVILTILTQLELGEVQYLRLLPQMNVTCSLNFHKTPPMELAARDAVVAGILNKSETRHGVHVFDIPTVANAIGITATDLVNQLQNLKFTGEITYELKDPAYCYVIVNVPGDLCSLAAKITKWLSEIECCKVWKLDAIFHAATFAEKSCERMNGCEGAQHTTCLQKKISYYFSEEDQKDFPSRMNQNSPFLRADIKVFVQSNSGAKFTPRAVARIMHGIASPAYPSATWSKTHFWGRYSHVDFKAVMEAAKAELMNFVGKDTA*

Click here to download the sequence:
Link to NCBI Protein BLAST