Transcript Information: R_Transcript_84258.p1


Annotated TAIR IDAT5G23880.1
Annotated Gene Namecleavage and polyadenylation specificity factor 100
Annotated Gene Symbol(s)EMB1265, CPSF100, ESP5, ATCPSF100
Annotation TypeOrtholog
Chromosome Positionchr5:8052550-8058147 | Forward length=739
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 126.043858923196
Replicate 216.273555336209
Replicate 320.485700289242
Condition 2: 8 Hour
Replicate 118.546881443781
Replicate 223.815248139799
Replicate 327.153628895538
Condition 3: 24 Hour
Replicate 125.508674697449
Replicate 220.740311206044
Replicate 323.785825418552


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_84258.p1 GENE.R_Transcript_84258~~R_Transcript_84258.p1 ORF type:complete len:738 (+),score=158.29,Lactamase_B_6|PF16661.1|4.5e-57,CPSF100_C|PF13299.2|2.7e+03,CPSF100_C|PF13299.2|0.031,CPSF100_C|PF13299.2|1.6e-16,Beta-Casp|PF10996.4|3.3e-21,Beta-Casp|PF10996.4|1e+04,RMMBL|PF07521.8|1.7e-07 R_Transcript_84258:70-2283(+)
ATGGGAACATCAGTACAAGTGACTCCACTGTGTGGAGTATACAACGAGAACCCACTCTCATATCTTGTCTCCATTGATGGCTTCAACTTCCTCATTGATTGCGGTTGGAATGACCACTTTGATCCCTCCCTTCTTCAACCCCTCTCCAAGGTTGCTTCTACTGTAGATGCGGTTCTCCTATCATATCCTGATACGCTGCACCTTGGTGCCTTGCCATATGCAATGAAGCAATTTGGACTATCTGCACCAATTTACGCAACAGAGCCTGTGTACAGACTGGGCCTGCTGACTATGTATGATCACTATCTTTCACGCAAGCAAGTATCGGAGTTTGATTTGTTCACACTGGATGATATTGATGCCGCTTTCCAAAATGTCACAAGATTGACGTACTCCCAGAACTGTCACTTGTCTGACAAAGGTGAAGGAATTGTTATTGCTCCCCATGTTGCTGGGCATCTACTGGGAGGCACAGTGTGGAAAATAACAAAGGATGGGGAGGAAGTTTTATATGCTGTTGACTTCAATCATCGCAAGGAAAGGCATTTAAATGGGACAATTCTTGAATCGTTTGTACGCCCAGCTGTACTAATAACGGATGCTTACAATGCTCTGAGTAATCAACCACCGAGACGCCAAAGAGATCATGAATTTTTAGATGCTATAACGAAAGCTCTTCGAGCTGAAGGAAAGGTGTTGCTTCCGGTTGATTCAGCGGGACGAGTATTGGAACTTATTTTAATACTAGAACAGCACTGGACCCAACATCATTTGACTTATCCAATATACTTTCTCACATATGTTTCCTCAAGTACAATAGATTATGTGAAGAGTTTCCTGGAGTGGATGAATGACTCCATAGCAAAGTCCTTTGAGCACACACGTGATAATGCTTTTCTTCTGAAGCATGTCTCGCTTCTGATCAACAAGAGTGAACTTGAGAAAGTCCCAGATGGTCCAAAGATTGTTTTAGCTTCCATGGCCAGTCTTGAAGCAGGATTTTCTCATGACATATTTGCCGAATGGGCAACTGATTCCAAGAATCTTGTCTTTTTTACAGAAAGAGGCCAGTTTGCCACATTAGCTCGCATGCTTCAAGCAGATCCACCTCCAAAAGCTGTCAAAATTACCTTATCTAAAAGAGTGCCTTTGGTGGGGGAGGAATTAGCGGCCTACGAAGAAGAGCAAAATCGCAAAAAGGAAGAAGCTTTAAAAGCAAGTCTGAACAAAGAAGAAGAGGTGAAGACAGGTTTGGATGCTAATCTAGGTGATCAAATGGTGATTGATTCTCGGGAAGCCCATGCTTTATCAGATGCAGATGGCACATTGGTTGGTGCATATAAGGACATTCTAATTGATGGATTCGTTGCACCTTCAACTAGTGTAGCTCCAATGTTTCCTTTTTTTGAAAACTCTGCAGCATGGGATGATTTTGGTGAAGTTATCAATCCGGATGATTTTACGATCAAAGAAGAACATATGGAGCACGCATACATGCAGGGACCTGGAGATCTCAATGGAAAACTTGATGAGGGCTCTGCCAGTCTTATGCTTGATACTACCCCTTCTAAAGTTGTGTCAACTGAGTTGACTGTACAAGTGAAGTGTTCCCTGGTCTACATGGATTTTGAGGGTCGTTCTGATGGGCGCTCAATTAAGTCGATTCTTGCTCATGTGGCTCCTCTAAAGCTTGTCTTGGTACATGGTTCAGCTGAGGCAACTGAGCACTTGAAGCAACATTGTCTGAAGCATGTTTGTCCGCATGTTTATGCTCCTCAAATAGCAGAAACTATAGATGTCACCTCAGATTTGTGTGCTTACAAAGTCCAACTCTCTGAGAAGTTGATGAGCAATGTTCTGTTTAAAAAGCTTGGAGATTATGAAATTGCTTGGGTTGATGCTGAAGTTGGGAAAACCGAAGGAGGCATGCTATCTTTGCTTCCTCTCTCGACTCCAGCACCACCTCACAAGTCGGTTTTGGTTGGTGACATAAAGATGGCAGATTTCAAGCAGTTTCTGGCTAGTAAAGGCATCCCGGCAGAGTTTTCTGCAGGAGCCTTGCGCTGTGGAGAGTTTGTTACTTTGCGAAAAGTTGGAGATCCTAGCCAAAAGGGTGGTGGAATTGGAAGCCAGCAAATTGTCATTGAAGGCCCTTTGTCAGATGAATACTATAAGATCAGGGATTATCTTTATTCTCAATTCTATTTGCTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_84258.p1 GENE.R_Transcript_84258~~R_Transcript_84258.p1 ORF type:complete len:738 (+),score=158.29,Lactamase_B_6|PF16661.1|4.5e-57,CPSF100_C|PF13299.2|2.7e+03,CPSF100_C|PF13299.2|0.031,CPSF100_C|PF13299.2|1.6e-16,Beta-Casp|PF10996.4|3.3e-21,Beta-Casp|PF10996.4|1e+04,RMMBL|PF07521.8|1.7e-07 R_Transcript_84258:70-2283(+)
MGTSVQVTPLCGVYNENPLSYLVSIDGFNFLIDCGWNDHFDPSLLQPLSKVASTVDAVLLSYPDTLHLGALPYAMKQFGLSAPIYATEPVYRLGLLTMYDHYLSRKQVSEFDLFTLDDIDAAFQNVTRLTYSQNCHLSDKGEGIVIAPHVAGHLLGGTVWKITKDGEEVLYAVDFNHRKERHLNGTILESFVRPAVLITDAYNALSNQPPRRQRDHEFLDAITKALRAEGKVLLPVDSAGRVLELILILEQHWTQHHLTYPIYFLTYVSSSTIDYVKSFLEWMNDSIAKSFEHTRDNAFLLKHVSLLINKSELEKVPDGPKIVLASMASLEAGFSHDIFAEWATDSKNLVFFTERGQFATLARMLQADPPPKAVKITLSKRVPLVGEELAAYEEEQNRKKEEALKASLNKEEEVKTGLDANLGDQMVIDSREAHALSDADGTLVGAYKDILIDGFVAPSTSVAPMFPFFENSAAWDDFGEVINPDDFTIKEEHMEHAYMQGPGDLNGKLDEGSASLMLDTTPSKVVSTELTVQVKCSLVYMDFEGRSDGRSIKSILAHVAPLKLVLVHGSAEATEHLKQHCLKHVCPHVYAPQIAETIDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWVDAEVGKTEGGMLSLLPLSTPAPPHKSVLVGDIKMADFKQFLASKGIPAEFSAGALRCGEFVTLRKVGDPSQKGGGIGSQQIVIEGPLSDEYYKIRDYLYSQFYLL*

Click here to download the sequence:
Link to NCBI Protein BLAST