Transcript Information: R_Transcript_84274.p1


Annotated TAIR IDAT1G23450.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:8324698-8326697 | Forward length=666
E-Value4.4E-235
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1186418522324
Replicate 20.34523064959533
Replicate 30.65056504383692
Condition 2: 8 Hour
Replicate 10.40260764487249
Replicate 20.56821373886421
Replicate 31.1666954509367
Condition 3: 24 Hour
Replicate 10.96086487649584
Replicate 21.1208950706721
Replicate 31.1123796103954


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_84274.p1 GENE.R_Transcript_84274~~R_Transcript_84274.p1 ORF type:complete len:669 (+),score=124.73,PPR|PF01535.16|0.022,PPR|PF01535.16|2.8e-05,PPR|PF01535.16|2e+02,PPR|PF01535.16|6.2,PPR|PF01535.16|0.0082,PPR|PF01535.16|6e+02,PPR|PF01535.16|1.2e+03,PPR|PF01535.16|2.9e-05,PPR|PF01535.16|1.8e+02,PPR|PF01535.16|0.51,PPR|PF01535.16|0.45,PPR|PF01535.16|0.00033,PPR|PF01535.16|0.071,PPR|PF01535.16|0.0089,PPR|PF01535.16|1.9e+03,PPR_2|PF13041.2|0.0048,PPR_2|PF13041.2|8.4e-07,PPR_2|PF13041.2|1.9e+02,PPR_2|PF13041.2|0.00039,PPR_2|PF13041.2|3.5e+03,PPR_2|PF13041.2|7.8e-07,PPR_2|PF13041.2|4.7e+03,PPR_2|PF13041.2|0.0077,PPR_2|PF13041.2|1.2e+02,PPR_2|PF13041.2|7.5e-08,PPR_2|PF13041.2|0.017,PPR_2|PF13041.2|9.2,PPR_3|PF13812.2|0.018,PPR_3|PF13812.2|0.051,PPR_3|PF13812.2|8.1e+02,PPR_3|PF13812.2|0.51,PPR_3|PF13812.2|4.3e+03,PPR_3|PF13812.2|0.11,PPR_3|PF13812.2|41,PPR_3|PF13812.2|10,PPR_3|PF13812.2|3.1,PPR_3|PF13812.2|0.16,PPR_3|PF13812.2|1.9,PPR_1|PF12854.3|0.26,PPR_1|PF12854.3|1.1,PPR_1|PF12854.3|11,PPR_1|PF12854.3|63,PPR_1|PF12854.3|0.0012,PPR_1|PF12854.3|41,PPR_1|PF12854.3|2.9,PPR_1|PF12854.3|4.1,PPR_1|PF12854.3|0.00017 R_Transcript_84274:73-2079(+)
ATGAAACTGCTATTATCGTACACCCAAAAACACATTACTACCCTACTCTCACAGCACCCAAAGCCAACTATATCATACCATTGGTTTCATCTAGAACCTTACTACAGAACCAATGTTTCAGATCAAGTCTTATCCTACAACCGGGTCATAGACAATCACATAAAGTCAGGTTCTTTAACCTCTGCCCTCCAAGTGTTCGACGAAATGCCCTTTCGAGATGCAGTCTCATGGAACTTGCTAATTTCTGGGTATAGACGCCATAACATGCCGTGCAAAGCCACTAAGTTGTATGCCCAAATGGTCACTCAAGGTTTCAGAGAAAGCCCAGTTACTGTTTCCTCTGTTTTGAGCATTTGTAGCAACTTTGGCCTTTATTTTGAGGGGATTCAAGTGCAGTGTAGAGCTATTTCACTTGGGTTTTGTGGGAACTTGTTTGTTGGTAGTGCAAGTGTGGATCTTTATTTGAATATGGGGTTAGTTGATGATGGGTTGAAAGTGTTGGAGCAGATGCCTGTGAGGAACTTTGCTGTTTGGAATTTGGTTTTGAGGGGGTTTTGTGAGTTGGGTTTGTGGGATCAAGTTTTGGAGTTGTACCCAAGAATTAAATATGATGGGGTTGAGTTGAATGAGCTTATGGTTTGTTACTTGATGCAGGGTTGTGGAAATGGGAGATATTTACATGAAGGAGAACAGTTGCATTGCCATGCTATCAAGGCTGGGTTTGTTGAATCAAATCTGTTTGTTGCCAATGCATTGGTGGATTTTTATTCTGCTTGTGGGAGTTTGAGTGGTGCTCAGAAATCATTCTATGTTATTCCTCATGAGGATGTAATTTCATGGAATTCAATTGTTTCTGCACATGCTCATAATGGGATGTTATTTGATGCCCTTGAGTACTTTAGAAGGATGCAATTTTATGACATGAAGCCTAGTTTACGTTCATTTGTGGCGCTGTTGAATTTGTGTAGTGAAGGCAAACATCTTTTTGTAGGAAGGCAGATACATTGTGTTGTTTTGAAACTTGGTTTTGATTATGGAAGCATCCATGTTCAGTCTGCTTTGATTGATATGTATGGAAAATGTTATGAGATTGAGAGTTCAGTGGATGTGTATGAGTGGTGTCCTGAGGTATCTAAAGAGTGCTGTAATGCTCTATTGACATCTATGTTGTACTGTAATTTTACTGAGGAGGTGGTTGAGTTGTTTAAATTTATGGTTGATGAGGGAATTGATTTTGATGAAGTATCCTTGTCTACCACACTAAAAGCAATGTCAGGCTCTTCTTTTGCTAGCTTATCAACCTGCAGATTGTTGCATTCTTGTGCTCTTAAATCAGGGTTAGAATCTCATATAGTAGTCTCAGCTTCATTGATTGATTCATATGCTAAACTGGGTCAAGTTGAGCTTTCGCGCCAAGTTTTTGATAGCCTTTCATCACCTAACATTGTGTGCTTGACATCAATCATAAATGGGTTTGCCTGGAATGGGTTAGGAAGAGAATGCCTGACATTGCTTGAAACAATGATTCGGAAGGGTTTGAAACCTGATAGAGTGACTTTATTATGTGTCTTGACAGGGTGTAGCCATTCAGGACTCATTGAAGAAGGAAGATGGGTTTTTGATTCAATGAAAACAGTGTATGGGATTGATCCAGACCAACGGCATTATTCATGCATGGTTGATCTCTTAGGACGTGCAGGGTTAGTTAATGAAGCTGAGGAGTTGCTCAAACAGTCACCAGTAAAGGATGATCCTGTCATATGGAGCTCATTGTTGAGAAGTTGTAGGATGCACAAGAATGAAGCAGTAGGACAAACAGCCGTAAAAAGTTTGATGGAACTCAAACATGGAGATCCTGCAGCTTGTCTACAAGCTTCAAGCTTTTATTCTGAAATAGGAGATTCTGAACTGTCTATGCACTACAGAGAGATTGGAATGGCTAGAAAAGTGATTCGGGAGATTGGTTATAGCTTTATTGATGGAAGTTGCCATAACCTTATGGACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_84274.p1 GENE.R_Transcript_84274~~R_Transcript_84274.p1 ORF type:complete len:669 (+),score=124.73,PPR|PF01535.16|0.022,PPR|PF01535.16|2.8e-05,PPR|PF01535.16|2e+02,PPR|PF01535.16|6.2,PPR|PF01535.16|0.0082,PPR|PF01535.16|6e+02,PPR|PF01535.16|1.2e+03,PPR|PF01535.16|2.9e-05,PPR|PF01535.16|1.8e+02,PPR|PF01535.16|0.51,PPR|PF01535.16|0.45,PPR|PF01535.16|0.00033,PPR|PF01535.16|0.071,PPR|PF01535.16|0.0089,PPR|PF01535.16|1.9e+03,PPR_2|PF13041.2|0.0048,PPR_2|PF13041.2|8.4e-07,PPR_2|PF13041.2|1.9e+02,PPR_2|PF13041.2|0.00039,PPR_2|PF13041.2|3.5e+03,PPR_2|PF13041.2|7.8e-07,PPR_2|PF13041.2|4.7e+03,PPR_2|PF13041.2|0.0077,PPR_2|PF13041.2|1.2e+02,PPR_2|PF13041.2|7.5e-08,PPR_2|PF13041.2|0.017,PPR_2|PF13041.2|9.2,PPR_3|PF13812.2|0.018,PPR_3|PF13812.2|0.051,PPR_3|PF13812.2|8.1e+02,PPR_3|PF13812.2|0.51,PPR_3|PF13812.2|4.3e+03,PPR_3|PF13812.2|0.11,PPR_3|PF13812.2|41,PPR_3|PF13812.2|10,PPR_3|PF13812.2|3.1,PPR_3|PF13812.2|0.16,PPR_3|PF13812.2|1.9,PPR_1|PF12854.3|0.26,PPR_1|PF12854.3|1.1,PPR_1|PF12854.3|11,PPR_1|PF12854.3|63,PPR_1|PF12854.3|0.0012,PPR_1|PF12854.3|41,PPR_1|PF12854.3|2.9,PPR_1|PF12854.3|4.1,PPR_1|PF12854.3|0.00017 R_Transcript_84274:73-2079(+)
MKLLLSYTQKHITTLLSQHPKPTISYHWFHLEPYYRTNVSDQVLSYNRVIDNHIKSGSLTSALQVFDEMPFRDAVSWNLLISGYRRHNMPCKATKLYAQMVTQGFRESPVTVSSVLSICSNFGLYFEGIQVQCRAISLGFCGNLFVGSASVDLYLNMGLVDDGLKVLEQMPVRNFAVWNLVLRGFCELGLWDQVLELYPRIKYDGVELNELMVCYLMQGCGNGRYLHEGEQLHCHAIKAGFVESNLFVANALVDFYSACGSLSGAQKSFYVIPHEDVISWNSIVSAHAHNGMLFDALEYFRRMQFYDMKPSLRSFVALLNLCSEGKHLFVGRQIHCVVLKLGFDYGSIHVQSALIDMYGKCYEIESSVDVYEWCPEVSKECCNALLTSMLYCNFTEEVVELFKFMVDEGIDFDEVSLSTTLKAMSGSSFASLSTCRLLHSCALKSGLESHIVVSASLIDSYAKLGQVELSRQVFDSLSSPNIVCLTSIINGFAWNGLGRECLTLLETMIRKGLKPDRVTLLCVLTGCSHSGLIEEGRWVFDSMKTVYGIDPDQRHYSCMVDLLGRAGLVNEAEELLKQSPVKDDPVIWSSLLRSCRMHKNEAVGQTAVKSLMELKHGDPAACLQASSFYSEIGDSELSMHYREIGMARKVIREIGYSFIDGSCHNLMD*

Click here to download the sequence:
Link to NCBI Protein BLAST