Transcript Information: R_Transcript_84276.p1


Annotated TAIR IDAT1G23460.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:8327382-8329622 | Forward length=460
E-Value5.6E-77
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.68326591809108
Replicate 20.11227968137058
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.3587307247249
Replicate 30.97067436472658
Condition 3: 24 Hour
Replicate 11.8415353391206
Replicate 20.58971280456089
Replicate 30.93637239302234


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_84276.p1 GENE.R_Transcript_84276~~R_Transcript_84276.p1 ORF type:complete len:187 (+),score=30.22,Glyco_hydro_28|PF00295.13|4.2e-11,Pectate_lyase_3|PF12708.3|1.6e-07 R_Transcript_84276:380-940(+)
ATGACAACCTTCATTGTGTTTTTCCTTAGCTTGCTGATTACTGCTCATGGTATGGCTGAAAACAAGCTACACAAGACAGTTGCCCTGCTTGGAGAACTTGAAAGTTTCGACATTTACGAAGAAGATGAAATAGAAGATTATGAAATGCCATCATGGACTAGCGGACATGGTAAGAAAGTTCTTGTGAATGTTGATAGCTTTGGGGCCATTGGAGATGGAGTTTCTGATGATACTCAGGCCTTCTTAAAAGCATGGAACCAATCCTGCACTACGCCGAATTCAGTCTTCTTGGTTCCTGGAGAGCATCGTTATCTGGTTAATGCAACAAAGTTTCGAGGACCATGTGCTGATAGATTAATAGTTCAAATTGATGGGACGATAGTGGCACCGGAAGAGCCTAAGAACTGGGATCCAAACTTTTTGCGGGCATGGTTGAGCTTTTACAACTTAACTGGCGTACTTTTCCAAGGCAGAGGGGTTATCGATGGTTCAGGCAGCAAATGGTGGGCAGCATCCTGCAAAAAGAATAAAACCAATGTAATTATATCTCTCATCATTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_84276.p1 GENE.R_Transcript_84276~~R_Transcript_84276.p1 ORF type:complete len:187 (+),score=30.22,Glyco_hydro_28|PF00295.13|4.2e-11,Pectate_lyase_3|PF12708.3|1.6e-07 R_Transcript_84276:380-940(+)
MTTFIVFFLSLLITAHGMAENKLHKTVALLGELESFDIYEEDEIEDYEMPSWTSGHGKKVLVNVDSFGAIGDGVSDDTQAFLKAWNQSCTTPNSVFLVPGEHRYLVNATKFRGPCADRLIVQIDGTIVAPEEPKNWDPNFLRAWLSFYNLTGVLFQGRGVIDGSGSKWWAASCKKNKTNVIISLII*

Click here to download the sequence:
Link to NCBI Protein BLAST