Transcript Information: R_Transcript_84279.p1


Annotated TAIR IDAT1G23460.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:8327382-8329622 | Forward length=460
E-Value2.9E-36
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.0932940082243
Replicate 212.082776654662
Replicate 38.4279506249995
Condition 2: 8 Hour
Replicate 110.394942666283
Replicate 28.8599720502811
Replicate 310.445738187204
Condition 3: 24 Hour
Replicate 113.64473448439
Replicate 28.1146707238916
Replicate 310.530876783319


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_84279.p1 GENE.R_Transcript_84279~~R_Transcript_84279.p1 ORF type:5prime_partial len:106 (+),score=16.76,Glyco_hydro_28|PF00295.13|2.6e-08 R_Transcript_84279:3-320(+)
GAAGCTGTGCAAATAAGTCAGATAATGTACCGGAATATTACAGGAACTACAAAGAGCAAGGAAGCCATGAAGTTTGCTTGCAGCGACACGGTGCCTTGCAGGCACATTGTCCTGACCAATATTGACTTGCAAAAGAAGGATGGCACAGCTGAGACTTATTGCAACTCCGCCACTGGCTTTGGTTTCGGAACTATCAATCCCCCTGCAGATTGCCTTACTTCCGAGGACAGGGATTATACCATGCTTCCCTCAGAAAGGGATTCTTATTCCAGAGTCAGTCAATCAAGAGAAGATCACCTTGTTCATACAGAGCTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_84279.p1 GENE.R_Transcript_84279~~R_Transcript_84279.p1 ORF type:5prime_partial len:106 (+),score=16.76,Glyco_hydro_28|PF00295.13|2.6e-08 R_Transcript_84279:3-320(+)
EAVQISQIMYRNITGTTKSKEAMKFACSDTVPCRHIVLTNIDLQKKDGTAETYCNSATGFGFGTINPPADCLTSEDRDYTMLPSERDSYSRVSQSREDHLVHTEL*

Click here to download the sequence:
Link to NCBI Protein BLAST