Transcript Information: R_Transcript_8437.p1


Annotated TAIR IDAT1G12470.1
Annotated Gene Namezinc ion binding
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:4251359-4257201 | Forward length=988
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 117.052108260329
Replicate 212.517025248178
Replicate 315.139776973975
Condition 2: 8 Hour
Replicate 114.052110754138
Replicate 214.643209059967
Replicate 317.435099674845
Condition 3: 24 Hour
Replicate 116.730385833954
Replicate 214.085899149751
Replicate 315.928400475586


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_8437.p1 GENE.R_Transcript_8437~~R_Transcript_8437.p1 ORF type:complete len:988 (+),score=218.55,Pep3_Vps18|PF05131.10|1.4e-39,Clathrin|PF00637.16|3.6e+02,Clathrin|PF00637.16|1.1e-10,Clathrin|PF00637.16|2.6e+03 R_Transcript_8437:326-3289(+)
ATGACTTCAGGGAGCAAGGTCTTCACTGTAGATCTTCTTGAACGGTATGCTGCCAAAGGACATGGGGTCATTACGTGTATGGCAGCTGGTAATGACGTCATTACATGGGGAACTAGTAAAGGGTGGATCATCCGTCATGACTTCGGACTTGGTGACTCATATGGTATTGATCTCTCGGGAGGGCGAACTGGGGATCAATCTATTCACAGAGTTTTTGTGGACCCTGGAGGGAGCCACTGTATTGCAACAATAGTTGGCGATGGAGGTGCTGAAACATTCTACATTCATGCAAAATGGAGCAAACCTCGTGTCCTTAGTAGATTGAAAGGTTTAGCTGTGAACGCTGTTGCTTGGAATAAACAGCAGATTACAGAAGCTTCCACAAAGGAAATCATTCTTGGTACTGATAACGGACAACTTTATGAGATGGCTGTGGATGAGAAGGATAAAAAGGAGAAGTATATAAAGCTTCTCTTTGAACTTACAGAACTTCCAGAAGCTTTTATGGGTTTGCAGATGGAAACAGCTAGTATCAGTACTGGGACTAGGTACTATGTGATGGCAGTGACTCCAAGGCGTCTTTATTCCTTTACTGGTATTGGGTCATTGGAGGGTGTCTTTGCAAGTTACCAAGATAGAGCTGTGCGTTTTATGGAGCTTCCTGGTGAAAATAACAATAGCGAACTGCACTTTTTCATAAAGCAGAAAAGAGCAGTGCATTTTGCGTGGCTCTCTGGAGTAGGAATCTACCATGGTGACCTGAATTTTGGAGCAAGCCACAGTTCACAGGATGGAGATGAAAATTTTGTGGAGAACAAGGCTTTACTGGATTATTCAAAGCTATCTGATGGTTCTGAAGCAGTAAAACCCAGTTCTTTGGCGATCTCCGAATTTCATTTTTTACTTCTTATTGGAAATAAGGTTAAGGTAATGAACAGGATTAGTGAGCAGATCATAGAGGAACTTCACTTTGACCTGACATCGGAGTCAGCTTCAAAGGGCATATTAGGACTCTGCAGCGATGCTTCTGCTGGTTTGTTTTATGCCTATGACCAGAATTCTATCTTTCAGGTGTCTGTTAATGATGAAGGCCGAGATATGTGGAAAGTATACCTCGACATGAAAGAGTATGCTGCAGCTTTGGCTAGCTGTGGTGATTCTCTACAGAGAGATCAAGTTTACCTAGCACAGGCTGAAGCTGCTTTCCCCTCAAAGGACTACTTCAGATCGGCATCTTTCTTTGCTAAGATCAATTATATTATGTCGTTTGAAGAGATCACCTTGAAGTTTATTAGTGTAAATGAGCAGGATGCCTTGAGGACCTTTTTATTGTGGAAACTTGATAGTCTGTCGAAAGATGATAAATGCCAGATCACAATGATTTCAACATGGGCAACTGAACTATATTTGGATAAGATTAATCGACTACTACTAGAAGATGATACTTCAAGTGTTCGTAATTCAGAGTATCAATCACTTATCAAAGAGTTTCGTGCTTTTCTAAGCGATTCTAAGGATGTATTGGACGAAGCAACCACCATGAAGTTGTTAGAGAGTTATGGAAGGGTCGATGAATTGGTCTTCTTTGCAAGTTTGAAGGGACAGTATGAGATCGTAGTCCACTACTATATTCAGCAAGGAGAAGCAAAGAAAGCCTTGGAAGTGCTTGAAAAGCCTGGTGTTTCCACAGATCTGCAGTACAAATTTGCACCTGACCTTATCATGCTTGATGCTTATGAAACTGTTGAATCATGGATGACAAGAACAGACCTGAACCCACGGAAACTGATTCCTGCTATGATGAGATATGCTAGCGAACCTCATGCAAAGAATGAGACACATCAAGTCATTAGATACTTGGAACACTCTGTTCATAGTCTGAATAATGAAGATCCTGGGATTCACAACTTGCTGCTTTCATTATATGCCAAGCAGGAAGATGATAGTGCTCTTCTGTGCTTTCTGCAATCCAAGTTTGGCAAAGGACGAGAAAATGGCCCTGAGTTCTTCTATGATCCTAAATATGCTTTAAGGTTGTGTCTTAAAGAAAAGCGGATGCGTGCTTGCGTTCATATATATAGTATGATGTCTATGCATGAAGAAGCTGTTGCTCTTGCTCTAAAGGTTGATCCTGAGCTGGCTATGGCCGAAGCTGACAAGGTTGAAGATGATGAAGAATTACGGAAGAAACTTTGGCTTATGATTGCCAAACATGTCATTGAGCAAGATCAGGGGGCTAACAGAGAAAACATAAGGAAAGCAATTGCATTCCTCAAAGAAACTGATGGCTTGTTGAAGATTGAAGACATTTTGCCATTCTTTCCAGACTTTGCTCTAATTGACGATTTCAGAGAGGCAATCTGCTCATCATTGGAGGACTACAACAAGCAAATTGAGCTGCTGAAGCAAGAAATGAACGACGCCACTTGTGGTGCAGACAATATTAGAAATGATATCAATGCCCTTGCTCAGAGATATGCAATCATTGAACGTGATGAAAAATGCGGGGTTTGCCAGCGGAAAATCTTGCATACAGCTCCAGATTTTGGCACCTCAAGGGGTTATGCAACTCTTGGCCCTATGGCTCCTTTCTATGTCTTCCCATGCGGTCATGCCTTTCATGCGCAATGCCTTATTGCCCATGTGACACGGTGTACTGATCGAGGACAAGGTGAACATATACTAGAGCTGCAAAAGCAGCTGACTTTGATTGCTGGTGAAACGAGGAAAGAATCTAATGGTAGCTTAACTGATCAGGAACCCATTGCTAGTATGAGCCAAGTTGACAAGATGCGCTCCCAGTTGGATGATGCAATAGCCAGTGAATGCCCATTTTGTGGTGAGTTGATGATCCAAGAGATATCCATGCCTTTTGTACTTGCTGAAGAAGAGGAGGTGGTAAATTCATGGCAGATAAAACCTCACAATCCTATCATCCAGAAGAGCTTGTCATTGCCTGTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_8437.p1 GENE.R_Transcript_8437~~R_Transcript_8437.p1 ORF type:complete len:988 (+),score=218.55,Pep3_Vps18|PF05131.10|1.4e-39,Clathrin|PF00637.16|3.6e+02,Clathrin|PF00637.16|1.1e-10,Clathrin|PF00637.16|2.6e+03 R_Transcript_8437:326-3289(+)
MTSGSKVFTVDLLERYAAKGHGVITCMAAGNDVITWGTSKGWIIRHDFGLGDSYGIDLSGGRTGDQSIHRVFVDPGGSHCIATIVGDGGAETFYIHAKWSKPRVLSRLKGLAVNAVAWNKQQITEASTKEIILGTDNGQLYEMAVDEKDKKEKYIKLLFELTELPEAFMGLQMETASISTGTRYYVMAVTPRRLYSFTGIGSLEGVFASYQDRAVRFMELPGENNNSELHFFIKQKRAVHFAWLSGVGIYHGDLNFGASHSSQDGDENFVENKALLDYSKLSDGSEAVKPSSLAISEFHFLLLIGNKVKVMNRISEQIIEELHFDLTSESASKGILGLCSDASAGLFYAYDQNSIFQVSVNDEGRDMWKVYLDMKEYAAALASCGDSLQRDQVYLAQAEAAFPSKDYFRSASFFAKINYIMSFEEITLKFISVNEQDALRTFLLWKLDSLSKDDKCQITMISTWATELYLDKINRLLLEDDTSSVRNSEYQSLIKEFRAFLSDSKDVLDEATTMKLLESYGRVDELVFFASLKGQYEIVVHYYIQQGEAKKALEVLEKPGVSTDLQYKFAPDLIMLDAYETVESWMTRTDLNPRKLIPAMMRYASEPHAKNETHQVIRYLEHSVHSLNNEDPGIHNLLLSLYAKQEDDSALLCFLQSKFGKGRENGPEFFYDPKYALRLCLKEKRMRACVHIYSMMSMHEEAVALALKVDPELAMAEADKVEDDEELRKKLWLMIAKHVIEQDQGANRENIRKAIAFLKETDGLLKIEDILPFFPDFALIDDFREAICSSLEDYNKQIELLKQEMNDATCGADNIRNDINALAQRYAIIERDEKCGVCQRKILHTAPDFGTSRGYATLGPMAPFYVFPCGHAFHAQCLIAHVTRCTDRGQGEHILELQKQLTLIAGETRKESNGSLTDQEPIASMSQVDKMRSQLDDAIASECPFCGELMIQEISMPFVLAEEEEVVNSWQIKPHNPIIQKSLSLPV*

Click here to download the sequence:
Link to NCBI Protein BLAST