Transcript Information: R_Transcript_84377.p1


Annotated TAIR IDAT5G64980.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02880.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:25960947-25963000 | Reverse length=344
E-Value3E-20
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0843343141417
Replicate 21.9402521836843
Replicate 30.22679938214012
Condition 2: 8 Hour
Replicate 10.40405717734728
Replicate 20.73798289904903
Replicate 30.89859458516767
Condition 3: 24 Hour
Replicate 11.2122934509679
Replicate 20.72789633302235
Replicate 30.50565654392172


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_84377.p1 GENE.R_Transcript_84377~~R_Transcript_84377.p1 ORF type:complete len:303 (+),score=67.66,HLH|PF00010.22|4.8e-06 R_Transcript_84377:516-1424(+)
ATGATACGTAATGAGGGCACAACTTACAATTATGGTGACTATTTCAATGGAGGATTGTTATTTGTTCCTGAGGACCCAACTGGGTGTGGACTAAGTGGTTTTAGTGGGATTTCCGACCTCCAAATGAAGGAAATACATAATTGTACTGAAAGCAATCTGACTGATGTTTCCAATCATGTTACTCCTTTGAAGACTGAGTCACTGATTGATCATTTTGAAGTTGAAAACTATGATCAATTATTCGAAACAGCTGGACCTACGTGCTCTAGTCAGTATTGTGGCTCGACAAATGAGAAACTCGATACTATGGAGTTGAATCATTGGATGCCATTGCCCAACGAAGAAGCTTTTTCAACTGAGACATGTATGGATATGGAATATCAACAATCCAAGAATCAAGCATTTCAACTTCAACCAGTAAACATGAGCAGTGCTCTTGAGTTACAGTCTACTTTGAAGGGTAAGACAGCTGAATCTGGTCTATCAGCAACACCATTGAAGAGTATGTTGAAAAGATCCAGAGAAGAAAAGGCGAAAGGAGAGTATAATCGTAGATATGCTGTAAATGAAAAGCTGCAAGCTTTGCATGAGGTGCTTCCGTCATCATTGAAGGGTTGTAACCGAGAATCTGTAGTAGAAAATGCCATGGACTACATTAAGCAATTGCAAGTTCAACTCAAGGTCTTAAGTGCAAGCAGACTGGGAGGCCAATCAACCTCTGTTCCTTTGGTCTTTGTGGAGGGGCATGGACACTATTATCAACATGACAAGATGTTTGAGAAGTCTCTTGAAGAATTTGTTGGAAGATTGATTGAGGAAAATCCAGCTGCAGCTCAGAAATTTTTAGAGAGAAAAGGCTTTTACATGATGCCCTTTGCTTCTGTAGATGCATTAAGCAGAGCAGAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_84377.p1 GENE.R_Transcript_84377~~R_Transcript_84377.p1 ORF type:complete len:303 (+),score=67.66,HLH|PF00010.22|4.8e-06 R_Transcript_84377:516-1424(+)
MIRNEGTTYNYGDYFNGGLLFVPEDPTGCGLSGFSGISDLQMKEIHNCTESNLTDVSNHVTPLKTESLIDHFEVENYDQLFETAGPTCSSQYCGSTNEKLDTMELNHWMPLPNEEAFSTETCMDMEYQQSKNQAFQLQPVNMSSALELQSTLKGKTAESGLSATPLKSMLKRSREEKAKGEYNRRYAVNEKLQALHEVLPSSLKGCNRESVVENAMDYIKQLQVQLKVLSASRLGGQSTSVPLVFVEGHGHYYQHDKMFEKSLEEFVGRLIEENPAAAQKFLERKGFYMMPFASVDALSRAE*

Click here to download the sequence:
Link to NCBI Protein BLAST