Transcript Information: R_Transcript_84378.p1


Annotated TAIR IDAT5G64980.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02880.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:25960947-25963000 | Reverse length=344
E-Value3E-20
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.3722479183205
Replicate 22.7707727822094
Replicate 33.9633358304193
Condition 2: 8 Hour
Replicate 11.2207029445841
Replicate 21.8360841394522
Replicate 31.9162990684279
Condition 3: 24 Hour
Replicate 12.8276478110369
Replicate 22.8458398568487
Replicate 32.760033142336


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_84378.p1 GENE.R_Transcript_84378~~R_Transcript_84378.p1 ORF type:complete len:341 (+),score=77.84,HLH|PF00010.22|5.8e-06 R_Transcript_84378:176-1198(+)
ATGATACGTAATGAGGGCACAACTTACAATTATGGTGACTATTTCAATGGAGGATTGTTATTTGTTCCTGAGGACCCAACTGGGTGTGGACTAAGTGGTTTTAGTGGGATTTCCGACCTCCAAATGAAGGAAATACATAATTGTACTGAAAGCAATCTGACTGATGTTTCCAATCATGTTACTCCTTTGAAGACTGAGTCACTGATTGATCATTTTGAAGTTAAAAGCTATGGTCAGTTATTCGAAACAGCTGGACCTATGTGCTCTAGTCAGTATTGTGGCTTGACAAATGAGAAACTCGATACTATGGAGTTGAATCATTGGATGCCATTGCCCAACGAAGAAGCTTTTTCAACTGAGACATGTATGGATATGGAATATCAACAATCCAAGAATCAAGCATTTCAACTTCAACCAGTAAACATGAGCAGTGCTCTTGAGTTACAGTCTACTTTGAAGGGTAAGACAGCTGAATCTGGTCTATCAGCAATATCAATATTGCAACAGAATCAAGCATTTCAACTTCAACCAGTAAACATGAGCAGTGCTCTTGAGTTACAGTCTACTTTGAAGGGTAAGACAGCTGAATCTGGTCTATCAGCAACACCATTGAAGAGTATGTTGAAAAGATCCAGAGAAGAAAAGGCGAAAGGAGAGTATAATCGTAGATATGCTGTAAATGAAAAGCTGCAAGCTTTGCATGAGGTGCTTCCGTCATCATTGAAGGGTTGTAACCGAGAATCTGTAGTAGAAAATGCCATGGACTACATTAAGCAATTGCAAGTTCAACTCAAGGTCTTAAGTGCAAGCAGACTGGGAGGCCAATCAACCTCTGTTCCTTTGGTCTTTGTGGAGGGGCATGGACACTATTATCAACATGACAAGATGTTTGAGAAGTCTCTTGAAGAATTTGTTGGAAGATTGATTGAGGAAAATCCAGCTGCAGCTCAGAAATTTTTAGAGAGAAAAGGCTTTTACATGATGCCCTTTGCTTCTGTAGATGCATTAAGCAGAGCAGAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_84378.p1 GENE.R_Transcript_84378~~R_Transcript_84378.p1 ORF type:complete len:341 (+),score=77.84,HLH|PF00010.22|5.8e-06 R_Transcript_84378:176-1198(+)
MIRNEGTTYNYGDYFNGGLLFVPEDPTGCGLSGFSGISDLQMKEIHNCTESNLTDVSNHVTPLKTESLIDHFEVKSYGQLFETAGPMCSSQYCGLTNEKLDTMELNHWMPLPNEEAFSTETCMDMEYQQSKNQAFQLQPVNMSSALELQSTLKGKTAESGLSAISILQQNQAFQLQPVNMSSALELQSTLKGKTAESGLSATPLKSMLKRSREEKAKGEYNRRYAVNEKLQALHEVLPSSLKGCNRESVVENAMDYIKQLQVQLKVLSASRLGGQSTSVPLVFVEGHGHYYQHDKMFEKSLEEFVGRLIEENPAAAQKFLERKGFYMMPFASVDALSRAE*

Click here to download the sequence:
Link to NCBI Protein BLAST