Transcript Information: R_Transcript_84444.p1


Annotated TAIR IDAT5G37770.1
Annotated Gene NameEF hand calcium-binding protein family
Annotated Gene Symbol(s)TCH2, CML24
Annotation TypeOrtholog
Chromosome Positionchr5:14999075-14999560 | Reverse length=161
E-Value1E-49
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 152.045604884401
Replicate 249.511546251946
Replicate 346.432576208417
Condition 2: 8 Hour
Replicate 133.089006685467
Replicate 239.131543222075
Replicate 352.369849560171
Condition 3: 24 Hour
Replicate 143.43368934971
Replicate 255.138147226443
Replicate 357.677059647905


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_84444.p1 GENE.R_Transcript_84444~~R_Transcript_84444.p1 ORF type:complete len:148 (+),score=27.11,EF-hand_1|PF00036.28|1.2e-08,EF-hand_1|PF00036.28|1.6e-06,EF-hand_1|PF00036.28|7.9e-08,EF-hand_1|PF00036.28|6e-08,EF-hand_6|PF13405.2|9.3e-07,EF-hand_6|PF13405.2|0.0051,EF-hand_6|PF13405.2|2.6e-08,EF-hand_6|PF13405.2|0.011,EF-hand_7|PF13499.2|2e-14,EF-hand_7|PF13499.2|1.9e-11,EF-hand_5|PF13202.2|6.8e-08,EF-hand_5|PF13202.2|0.00012,EF-hand_5|PF13202.2|0.00049,EF-hand_5|PF13202.2|4.6e-05,EF-hand_8|PF13833.2|5.3e-06,EF-hand_8|PF13833.2|1.7e-05,EF-hand_8|PF13833.2|0.024,EF-hand_8|PF13833.2|2.5e-07,SPARC_Ca_bdg|PF10591.5|0.00011,SPARC_Ca_bdg|PF10591.5|0.0044,EF-hand_9|PF14658.2|0.0083,EF-hand_9|PF14658.2|0.074,UPF0154|PF03672.9|0.00077,UPF0154|PF03672.9|19 R_Transcript_84444:280-723(+)
ATGGCGAAGAAGAATTCGAAAACAGACTCAGAAGTGGAGAGAATGTTCGAGAAATTCGACGCCAATGGCGACGGAAAGATATCGGAAACGGAGCTCCGTTCACTTTTGCAAGCCTTGGGATCCGAAACTTCCAAGGAGAAGGTGAAACGGATGATGGATGAGATGGACAAAGACGGTGACGGATTCGTCGATCTGGCGGAGTTTTCAGAGTTCCACGCTGGATCTGGCGGCAATGTAGGGTCCACCAACGAACTCCAAGAGGCCTTCAATCTCTACGATAAAGACGGTAATGGCTTGATCTCGGCGCGTGAACTTCACGCCGTTTTGAAGTCGCTTGGTGAGAAGTGTTCTCTCAAGGATTGTTCTAGAATGATCCAGTCTGTTGATGCTGATGGTGATGGTCATGTTAATTTCGAAGAGTTCAAGAAGATGATGGCCGCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_84444.p1 GENE.R_Transcript_84444~~R_Transcript_84444.p1 ORF type:complete len:148 (+),score=27.11,EF-hand_1|PF00036.28|1.2e-08,EF-hand_1|PF00036.28|1.6e-06,EF-hand_1|PF00036.28|7.9e-08,EF-hand_1|PF00036.28|6e-08,EF-hand_6|PF13405.2|9.3e-07,EF-hand_6|PF13405.2|0.0051,EF-hand_6|PF13405.2|2.6e-08,EF-hand_6|PF13405.2|0.011,EF-hand_7|PF13499.2|2e-14,EF-hand_7|PF13499.2|1.9e-11,EF-hand_5|PF13202.2|6.8e-08,EF-hand_5|PF13202.2|0.00012,EF-hand_5|PF13202.2|0.00049,EF-hand_5|PF13202.2|4.6e-05,EF-hand_8|PF13833.2|5.3e-06,EF-hand_8|PF13833.2|1.7e-05,EF-hand_8|PF13833.2|0.024,EF-hand_8|PF13833.2|2.5e-07,SPARC_Ca_bdg|PF10591.5|0.00011,SPARC_Ca_bdg|PF10591.5|0.0044,EF-hand_9|PF14658.2|0.0083,EF-hand_9|PF14658.2|0.074,UPF0154|PF03672.9|0.00077,UPF0154|PF03672.9|19 R_Transcript_84444:280-723(+)
MAKKNSKTDSEVERMFEKFDANGDGKISETELRSLLQALGSETSKEKVKRMMDEMDKDGDGFVDLAEFSEFHAGSGGNVGSTNELQEAFNLYDKDGNGLISARELHAVLKSLGEKCSLKDCSRMIQSVDADGDGHVNFEEFKKMMAA*

Click here to download the sequence:
Link to NCBI Protein BLAST