Transcript Information: R_Transcript_8449.p1


Annotated TAIR IDAT5G39600.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Ribosomal protein L53, mitochondrial (InterPro:IPR019716); Has 50 Blast hits to 50 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:15854188-15854771 | Reverse length=127
E-Value3.4E-70
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 139.901821621943
Replicate 237.598026326859
Replicate 339.598468867767
Condition 2: 8 Hour
Replicate 137.203329687287
Replicate 234.32135352368
Replicate 343.901569872564
Condition 3: 24 Hour
Replicate 158.195371809762
Replicate 262.917327687848
Replicate 349.374589642536


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_8449.p1 GENE.R_Transcript_8449~~R_Transcript_8449.p1 ORF type:complete len:129 (+),score=39.58,MRP_L53|PF10780.5|1.3e-13 R_Transcript_8449:95-481(+)
ATGTTGAAGTTCTTGTCAAAGGTGAAGCTAGAGTTCAACGCATTAGACGCTCGTGCAGGGGCATGCATGGAGTTCTTAGCCCAGTGCAGCTCAGGTAAAGCGAAAGAGTCAAACCCAGCATGTCAAGTTGAAGTCAAACGTAGAACTGACGACCACCCTCCTCAAATCAAGGTCACTTTCGTTAATGGAGTTGAGGAAGTCTTTGATGCTTCAAAAACCTCTGCTCAGTCTATCAGATCTCTCATCCTTGACAAGGGTCAGTACCTTGAGACTGAACAGATGTTTCGTGATGCTGGTGAAGCTTGGCCTGTTGTTATTCCTGATGATGAACTTAAGTTACCTGCTCCTGGGATGAAGCCAAGGAAAGCAGAGGACAAGAAGCAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_8449.p1 GENE.R_Transcript_8449~~R_Transcript_8449.p1 ORF type:complete len:129 (+),score=39.58,MRP_L53|PF10780.5|1.3e-13 R_Transcript_8449:95-481(+)
MLKFLSKVKLEFNALDARAGACMEFLAQCSSGKAKESNPACQVEVKRRTDDHPPQIKVTFVNGVEEVFDASKTSAQSIRSLILDKGQYLETEQMFRDAGEAWPVVIPDDELKLPAPGMKPRKAEDKKQ*

Click here to download the sequence:
Link to NCBI Protein BLAST