Transcript Information: R_Transcript_84501.p1


Annotated TAIR IDAT1G11070.1
Annotated Gene NameBEST Arabidopsis thaliana protein match is: Hydroxyproline-rich glycoprotein family protein (TAIR:AT1G61080.1); Has 579 Blast hits to 567 proteins in 152 species: Archae - 0; Bacteria - 68; Metazoa - 159; Fungi - 113; Plants - 172; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:3690406-3693648 | Reverse length=763
E-Value1.6E-20
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.27269368099007
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.26896657183631
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_84501.p1 GENE.R_Transcript_84501~~R_Transcript_84501.p1 ORF type:3prime_partial len:82 (-),score=20.35 R_Transcript_84501:2-244(-)
ATGAAGCATAAAAAACAAATGCGTTTTGATATCAGCAACCATTGTCACAGGACCAACAAAACTAACAAGAAATTCATGCAGATTAAAGGAGAACTGGAAGCTTTAGAAAGAACCAAAGATGAAGAAGCAAAGAAATTTCAGAGCCACAACATCCACTTTGATTTCAACATCCTTGTAAAGATCAAGGAAGCCCTAGTTGATGTCTCATCAAGCTGCATGGAGTTGGCATTGAAAGTAAGTGAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_84501.p1 GENE.R_Transcript_84501~~R_Transcript_84501.p1 ORF type:3prime_partial len:82 (-),score=20.35 R_Transcript_84501:2-244(-)
MKHKKQMRFDISNHCHRTNKTNKKFMQIKGELEALERTKDEEAKKFQSHNIHFDFNILVKIKEALVDVSSSCMELALKVSE

Click here to download the sequence:
Link to NCBI Protein BLAST