Transcript Information: R_Transcript_8453.p1


Annotated TAIR IDAT5G39600.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Ribosomal protein L53, mitochondrial (InterPro:IPR019716); Has 50 Blast hits to 50 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:15854188-15854771 | Reverse length=127
E-Value4.3E-63
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 126.809036402243
Replicate 227.229577102387
Replicate 329.52821643254
Condition 2: 8 Hour
Replicate 127.546598065651
Replicate 230.396823752862
Replicate 329.496367258129
Condition 3: 24 Hour
Replicate 133.001847889825
Replicate 230.498287684626
Replicate 331.805570873148


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_8453.p1 GENE.R_Transcript_8453~~R_Transcript_8453.p1 ORF type:complete len:128 (+),score=32.69,MRP_L53|PF10780.5|1.2e-12 R_Transcript_8453:174-557(+)
ATGTTGAAGTTCTTATCAAAGGTGAAGGTTGATTTCAACGCCCTAGACTCCCGTGCAGTAGCATGTATGGAATTCATAGCCCAATGCAATTCTGGGAAAGCCAAACAATCAAACCCTTCTTGTGAAATCAAAGTGAATCGTCGAACAGATGATCACCCACCTCAAATCAAAGTCACTTTCCTTAATGGGGTTGAACAAGTCTTTGACGCTTCCACCACTTCTGCTCAATCTATTCGTTCTCTCATTCTTGACAAGGGTCAGTACCTTCACACTGAACAGATGTTTCGTGATGCTGGTGAAAAATGGCCTGTCAATATTCCTGAAGACGAGCTCCACACACCTGCCCCTCGGGTTAAGCCTGTGAAAGCAGAGGAGAAGCAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_8453.p1 GENE.R_Transcript_8453~~R_Transcript_8453.p1 ORF type:complete len:128 (+),score=32.69,MRP_L53|PF10780.5|1.2e-12 R_Transcript_8453:174-557(+)
MLKFLSKVKVDFNALDSRAVACMEFIAQCNSGKAKQSNPSCEIKVNRRTDDHPPQIKVTFLNGVEQVFDASTTSAQSIRSLILDKGQYLHTEQMFRDAGEKWPVNIPEDELHTPAPRVKPVKAEEKQ*

Click here to download the sequence:
Link to NCBI Protein BLAST