Transcript Information: R_Transcript_84543.p1


Annotated TAIR IDAT1G10930.1
Annotated Gene NameDNA helicase (RECQl4A)
Annotated Gene Symbol(s)ATSGS1, RECQ4A, ATRECQ4A
Annotation TypeOrtholog
Chromosome Positionchr1:3648032-3654997 | Reverse length=1188
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.9121868533443
Replicate 25.3007053509998
Replicate 35.3511641105766
Condition 2: 8 Hour
Replicate 13.552457455461
Replicate 23.5374181929089
Replicate 35.3264562312283
Condition 3: 24 Hour
Replicate 18.4868615243398
Replicate 27.1589200989087
Replicate 38.4680300100127


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_84543.p1 GENE.R_Transcript_84543~~R_Transcript_84543.p1 ORF type:complete len:1220 (+),score=261.10,RQC|PF09382.6|1e+03,RQC|PF09382.6|1.5e+03,RQC|PF09382.6|4.4e-23,DEAD|PF00270.25|5.5e-19,Helicase_C|PF00271.27|1.4e+02,Helicase_C|PF00271.27|6.5e-17,HRDC|PF00570.19|6.9e-15,RecQ_Zn_bind|PF16124.1|2.4e-14 R_Transcript_84543:323-3982(+)
ATGAGCGGAAGAAATAGGGTTGCTGGTGTGTCAAAACCTAATCAGAAGCTTCCTAAAGTTAACTTGTTGGAGCATGTCCAGTCACTTGATAAAAGTTCGTCTCAGCATAATAAGTCTCTATCCTCGAATTTTCTCTTCTCTCTGCCCTCACAAAAGCCACATTCTGAAGGTGTAAGGATGATGGGCTGTCAAGTCCAGAGTATTGCAAGGTCAAACTTAGACCAGGCCTGGCAAGCTCTTTCAAGCCTTCAGCTTGGTTGCAGGAACTATGTGAGACCAGGGAAAACCTTACCACCAGTTAAAGATGCAAATGCCTTTCAATATACTGGAACACGCGTGACTTTAGAGGCTTCTTATGATAACAAAGCCAAATATGTTGAAAACCAACAGGGGAAGCATAAACTCAGTGAAAGCAATGGTAGATGTGGCGACTCTGTGAGGTTCCCCTCCACTGTGGTTCAAACATATAGGGTGCCTGAAGTAGGAAAACCTTACAATGGTGAAAGCAACAGAGAAGTGTCAGTGTCAGACAGTTCTCGTCCCCAAGCTGTGGAAGGTTTATGCAATGAGGATGCCGTGTTTGCAAGAGATATCAAGGGGCCAGATGAGGCAGTTTTTGATGGCATAAACGATGATGACATTCTAGGGAACATTGACGTTGACCAAATAGTCATGGAGCACTACCAATCAAGTGGAACACCTCAACCTACTACTAGTTCTAAGCCTCTACCAGTAATATCAGATGTAGATACAAATGTTAGACCTGACAACACTGACATCCCAGCAGAACTCTGCTCTACCTGCAATCATGGATGTAAGTTAGGACTATGTCCAGAAGCTGCAAATCATCTGCAAGAGATGAAAGACATGTTAATTGCAATTTCAAATGAACTTCTTGACAATATGGATCTAAATCCTGAAAGGATGGAGGAACTCCGGCAGGACAGGTTGCGGCTAAATAAGCAAATGCAGCTGCTTGAGACTCATATCAAGTCTTCGGCTATGGATATTGAGAGGCAGAGTTCACAATTTTCAGCATCAACAGCCAATACTCATTTTCAGTATCAGACTCCTCAGGCAGTCTTTAAAACGATGAATGGATATGATACTCCTGAGGCAGTCTTTAAAACGATGAATGGATATGATACTCCTCAGGCATCTGGGTGTGGAACAGTTCCAATGAGTCTAGATAATCAGTTCAGTGCATTTGCTGATACTGGTGGCAATGATAGGTTCTCTTCTGTGGAGAGGTTTGATTATACGTCAGGTCCCGTAGAGAGGGAAATACACACACCAAGGCTCATTAAAGTCACTTACATTGAAGGTTCAAATGACAGGAAGTGGAGTAGCAGGGATTTTCCTTGGACTAAGAAGCTGGAGGTTAACAACAAAAAGGTCTTTGGAAACCACTCTTTTCGACCCAATCAAAGAGAAGTGATCAATGCAACTATGAGTGGCCATGATGTCTTTGTTTTAATGCCAACTGGAGGAGGAAAAAGCCTAACATATCAGCTTCCCGCTTTGATTTGTCCAGGAATAACTTTAGTTGTTTCACCCCTTGTTTCTCTCATCCAAGATCAGATTATGCATCTTTTGCAGGCAAATATACCAGCTGCTTACTTGAGCGCTGCCATGGAATGGAGTGAACAACAGGAGATACTTAGAGAACTCTGTTCGGATAACTGCAGATATAAGCTCTTGTATGTCACACCAGAAAAAGTTGCCAAAAGTGATGTTTTTCTACGGAATCTGGAGAAGTTGTATAGCTGTGAGTTGCTTGCCAGGATTGTTATTGATGAAGCTCATTGTGTTAGCCAATGGGGACATGATTTTAGGCCTGATTATCAGAGTCTTGGTATTTTGAAACAGAAGTTTCCAACCACACCGGTTTTGGCTTTAACTGCTACAGCAACAGCTGTTGTTAAGGAAGATGTAGTGCAAGCACTTGGTCTTGCCAATTGCATTATTTTTCGTCAAAGTTTCAACCGTCCAAATTTGTCTTATTCAGTTATCCCTAAAACAAAAAGGTGTTTGGAGGAGATTAACAAGTTTATTAGAGAAAACCATTTTGATGAATGCGGAATTATTTATTGCCTTTCAAGAATGGACTGTGAAAAGGTTGCAGAGAAGTTACAGGAATTTGGACATAAAGCAGCTTTTTACCATGGAAGCATGGATACTGGTCAACGTGCCTTTGTTCAGAAGCAGTGGAGCAAAGATGAAATTAATATAATCTGTGCAACTGTGGCTTTTGGAATGGGTATCAACAAACCAGATGTTCGATTTGTGATTCATCACTCTATCCCGAAATCTATTGAAGGTTACCATCAGGAATGTGGTCGTGCTGGTAGAGATGGCCTGCCCTCATCTTGTGTTCTGTTTTACAGTTACAGTGATTATATTCGTGTCAAGCATATGCTCAGTCAAGGGGCAGCAGAGCAAACTCCATTCACCATTGGACAAAATCGCTTGAATTCTACGAGTTCAGGAAGGATAGTTGAAACTAACATGGAAAACCTTCTGCATATGGTCAGTTATTGCGAAAATGAAGTTGATTGCCGACGTCTCCTACAACTTGCCCACTTTGGAGAAAAGTTTGATTCCGGTAACTGTCAAAAAACATGTGACAACTGTTCCAAGGTTAAAATTTCTGTTGAGAAGGACATGACGCATGTTGCAAAGCAACTGGTGGAGCTAGTGAAGTCAACAAGGCAGCAATTCTCATCTGCCCACATCTTGGAAGTATTTAGGGGCTCCTTAAGCCAATATGTGAAGAAACAAAAACATGAAACACTGAGCTTGCATGGAGTTGGGAAACATTTGGCTAAGGGTGAAGCATCTCGAGTATTGCGTCACCTAGTTGTTGAAGATATTCTAGTTGAGGAGGTCAAGAAAAGTGACATCTATGGATCAGTCTCATCTATCCTAAAGGTCAATGAACCCCGATGTAGAAATCTTTTCTGTGGCAGTCAAAGGATTATTTTAAGATTTCCGTCCTCTGCCAAAGCTTCAGCTTTAAAATTGACGAAAGCTCAGGGAACACCAGCAAAGGACTGGCTTCCATCTGGGAAAACAAGTCCTCCACAAAGTCACGCTTCTTCTAACCCTCAATCACAAGCTGACCTGGATCTCTGTGCCAAATTATACTCTGCTCTTAGAGTGCTGAGGACTGCCATAATGAAAGAAAGTGGGGAAGGGGTCATGGCACATCACATATTTGGGAATGCTACATTGCACAGTATAAGCAAGAGGGTGCCTCGAACGAAAGAAGAATTACTTGATATCAATGGCATTGGCAAGGCAAAGGTGCTCAAGTATGGTGATCGTGTGCTTGAAACAATTGAAGCTATCATAAAGGAGCACTACAAGTCCCATAAAACCACCAGCAGCAGTAATGATAGTACAGAGTCAATAAAAAGGAGAAGAGATGCTGCCAAGCTTTCAAACGCAACCACCAATGAGGATGAAGACATGATGGGAAGCACTGGGAGATCGAAGAAAAGGGCTGTGAAGAAAAATTTTGGAGTCGTTCAACCTTTGGAGATCGATGAATGCATAGATGATGCAGATATTGATTATGATGATTCATTTTTCGAGTTTCAGGGTGATGATTCAAATGTGAATGTTAATGGCAGAAAACTGCCTAAATGGTCAATATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_84543.p1 GENE.R_Transcript_84543~~R_Transcript_84543.p1 ORF type:complete len:1220 (+),score=261.10,RQC|PF09382.6|1e+03,RQC|PF09382.6|1.5e+03,RQC|PF09382.6|4.4e-23,DEAD|PF00270.25|5.5e-19,Helicase_C|PF00271.27|1.4e+02,Helicase_C|PF00271.27|6.5e-17,HRDC|PF00570.19|6.9e-15,RecQ_Zn_bind|PF16124.1|2.4e-14 R_Transcript_84543:323-3982(+)
MSGRNRVAGVSKPNQKLPKVNLLEHVQSLDKSSSQHNKSLSSNFLFSLPSQKPHSEGVRMMGCQVQSIARSNLDQAWQALSSLQLGCRNYVRPGKTLPPVKDANAFQYTGTRVTLEASYDNKAKYVENQQGKHKLSESNGRCGDSVRFPSTVVQTYRVPEVGKPYNGESNREVSVSDSSRPQAVEGLCNEDAVFARDIKGPDEAVFDGINDDDILGNIDVDQIVMEHYQSSGTPQPTTSSKPLPVISDVDTNVRPDNTDIPAELCSTCNHGCKLGLCPEAANHLQEMKDMLIAISNELLDNMDLNPERMEELRQDRLRLNKQMQLLETHIKSSAMDIERQSSQFSASTANTHFQYQTPQAVFKTMNGYDTPEAVFKTMNGYDTPQASGCGTVPMSLDNQFSAFADTGGNDRFSSVERFDYTSGPVEREIHTPRLIKVTYIEGSNDRKWSSRDFPWTKKLEVNNKKVFGNHSFRPNQREVINATMSGHDVFVLMPTGGGKSLTYQLPALICPGITLVVSPLVSLIQDQIMHLLQANIPAAYLSAAMEWSEQQEILRELCSDNCRYKLLYVTPEKVAKSDVFLRNLEKLYSCELLARIVIDEAHCVSQWGHDFRPDYQSLGILKQKFPTTPVLALTATATAVVKEDVVQALGLANCIIFRQSFNRPNLSYSVIPKTKRCLEEINKFIRENHFDECGIIYCLSRMDCEKVAEKLQEFGHKAAFYHGSMDTGQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSIPKSIEGYHQECGRAGRDGLPSSCVLFYSYSDYIRVKHMLSQGAAEQTPFTIGQNRLNSTSSGRIVETNMENLLHMVSYCENEVDCRRLLQLAHFGEKFDSGNCQKTCDNCSKVKISVEKDMTHVAKQLVELVKSTRQQFSSAHILEVFRGSLSQYVKKQKHETLSLHGVGKHLAKGEASRVLRHLVVEDILVEEVKKSDIYGSVSSILKVNEPRCRNLFCGSQRIILRFPSSAKASALKLTKAQGTPAKDWLPSGKTSPPQSHASSNPQSQADLDLCAKLYSALRVLRTAIMKESGEGVMAHHIFGNATLHSISKRVPRTKEELLDINGIGKAKVLKYGDRVLETIEAIIKEHYKSHKTTSSSNDSTESIKRRRDAAKLSNATTNEDEDMMGSTGRSKKRAVKKNFGVVQPLEIDECIDDADIDYDDSFFEFQGDDSNVNVNGRKLPKWSI*

Click here to download the sequence:
Link to NCBI Protein BLAST