Transcript Information: R_Transcript_84562.p1


Annotated TAIR IDAT1G09040.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: leaf; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G09050.1); Has 614 Blast hits to 567 proteins in 104 species: Archae - 2; Bacteria - 12; Metazoa - 344; Fungi - 31; Plants - 81; Viruses - 0; Other Eukaryotes - 144 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:2912362-2915174 | Forward length=911
E-Value1E-116
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.6428766382353
Replicate 22.4495683819014
Replicate 32.6963139045471
Condition 2: 8 Hour
Replicate 11.9894765269637
Replicate 22.5388917923846
Replicate 33.2710714972156
Condition 3: 24 Hour
Replicate 13.3480135540402
Replicate 22.573113537234
Replicate 33.4655532420921


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_84562.p1 GENE.R_Transcript_84562~~R_Transcript_84562.p1 ORF type:5prime_partial len:960 (+),score=195.18 R_Transcript_84562:2-2881(+)
AAAAAAAAAAAAAAAAAAAAAATTCTAAGTCCCTCCTTCAAAAAAACCACTTACTCACAAGCTCTTAAGATGGACTCAAGTTATCAGGATCAAGAAGACAAAAGCTCACCGGAAACGTTTTCTGATTCCTCTGTTCCACCCGATTCTCCTGATACAAGTGACGTATTTGGAGAACCACTGGTGCACCCACGAGTTGGTGATGAGTATCAGGTGGAAATTCCCCCTTTATTACACGAGTCTGAACTTCTTCATCCTCAGATGAATCCAGCTCTTTCTGAAGATGTCAGTGATTCTTCCTATTCTTTTCTAGTGGGACTTCCCGTACCAGTAATGTGGGTCTGTGATCAGGCAACTCCAATAAAAAATGAGAGGATGGAATCCGCCTGTTACCCCAATGCACTTTCCACAGATGGACCTGTGGAATCTGAAAACATAGCAATAAGCCGGACTTCTTCACTTCAGAAAGAACCAACTGTCAAAGTTGATCCCCCTGATCAAACGTGTGTCAGTAATTTGTACTATATTGTCCCTGGCTTGTCAACTGAATTGTGGAGTGATTTTGAAGCTGATTGTTTCCTTCTCGGTTTGTATCTATTTGGGAAGAATCTTCTTCAAGTGAGGAGATTCATGGACAGCAAAGACATGGGTCAAATACTGGCTTTCTATTATGGTCGATTTTATGGGTCTGCTGGATATCATAAATGGTCAGAGTGCCGGAAGATGAGGAGCAGAAAATGTGTACTTGGACACAAGTTTTTCACAGGATATAGGCAGCAGGAACTCTTTTCACGTTTGTTTCCTCGTCTCAGTGAAGAATCCAAAACCAAATTGTTGGAGGCTTCCAGGGCATTTGCCGAGGGAAGGACTTCACTAGATGAATATGTCTCCTCAATCAAGACTTTGGTTGGTATAAATGCTTTGGTAGAAGCTGTAGGAATTGGGAAGGGAAAAGAAGACCTTACGACTCTCTTTTTAGATAGCTCCAAGAATAGCCAGAATCGTCCTGAAATACCTTCTGGCAAGGCCTGTTCCTCTCTTACGTGTGCTGAGATTGTCCAGTATTTAACAGGAGACTTCAGGCTTAGCAAAGCTCGATCAAATGATCTCTTCTGGGAAGCAGTTTGGCCCCGCTTGTTGGCAAGAGGGTGGCATTCTGAGCAGCCAAGGGGTGATGGTTATGTAGGGTCCAAGAATTCATTGGTGTTCCTTATGCCAGGAATTAAGAAATTCTCCAGGAGGAAGCTTGCAAAAGGAGACCACTACTTCGATTCTGTTAGTGACGTCTTGGCAAAAGTTGCCAGTGAACCAGAACTTCTTGAGCTGGAGGCTGATGAAGCTAAACCTAGTACCTCGAAAGAAGAAAATGGGTGGGCCGTAGAAGTGACAGATGATGATCAAGAACCTTCTGATAATGAGCGGCATTGTTACCTGAAGCCCCGGGTTTCAGGGCTTTCAAATCTGACAAAGTTCACTGTCGTGGACACCAGTCTGCCTCATGATGATAACCCATGCAAGGTGAGGGAACTGAGGAATTTGCCTCTTGAAGCCATAAGATCCACTACCCTGTCACGTCGATCAATTAAAACCGGAACCGAATTACTGGATACTGCTAATGGGCTGCTAAATGATTACCAACAAGGCTCGACTTCTGCCCATGCAAAAGGACCATTGAATGATGTTGGTGAGAATCAAAGAATGCAAGGCAATAGCGTCAATCCGCTAAAAGTGCCACCTAATGCCAGGCTTCCCACTGACCATAAATCCAGAGCCATAAAGCATCAATTCAGCCGTCGTGTAAAGCCTGGGCCATCAGGCAGCTCGGGCCCAGTCACAAAAAGACGTAGATTAGCCTCTTGTGTCGATGCAGATTTGACTTATGTGCTGAGCTTACCCGCTGCAAGCAAGAATGGTGCTTTTAGAGGTATGAGTAAGAATGCAGCCCTGCCTAAAACGAGCCAACCTCATGTGAAAGCGTTATCTATTGATGTACCAGCTCCGAGGTCTTCAAATAAGATCCTTAAGATAAGCTTCAATGGGAACCGTGTTGATTCTCGAGGTGTACAGGATGAGAAAATACTCAGACAGCATACTGTGATTGATTTGAACATTCCTCAGGTTCCAATTGAACCTGAGATTGATAATAAAGTTAAGTTGGAAGTAGTGGAAAATAAAGCCAACTGGCAGTCTGGTGCTGAGAAACCAAGCAATAAGATGGAAGGAGCAGAAAATCACGATAAGCGGCTTTGTGATGCTGAGAAACCGAAGCCAAAACAAAAGGTTGAAGAAGGGGAAAACAACACCAATCAGCATCCTCACACTGAGAAACCGAAGAAAAAGCATAAGGTGGAAGAAGGGCAAAACACCGCCAATCAGCAATCTGATGCTGAGAAACTGAAGCCAAAACAAAAGGTGGAAGAAGGGGTAAACAACACCAATCAGAATTCTGATGCCGAGAAACCCAAGTACTGTGATCCTGCTGTCGCCTCTTCTGATATGAAGGAGGCCCCAGTGAGTTCTCCTAACAAGGATGTAGGGTTTGACCAACAGCCAAGAAGGCAAAGCACCAGGAATCGACCATTAACAACCAAGGCCCTTGAAGCTCTTGAGATCGGGTTTTTAAACCCAGTAAGGCACAGTAGAAAGCGCTCTCCATCAACAACACAAGACCAAAGGTCCAAGCGTTCTCGTCAACCACGCCCCAAGAGCTCCATGTTTCCTAATGTTACGAGTTTGGAGGAGCCGGGAGCTGATAGAACATGTAATGGCAAGACAGACATGCTAGGAAGCACACCTATTGTTCCTGTACAAATCCAAAAGGAAGCAGTTTCTCATGAACTTCAAGAGCTGTCAAAATCATCCTGTCCCCCTGCAGCGCCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_84562.p1 GENE.R_Transcript_84562~~R_Transcript_84562.p1 ORF type:5prime_partial len:960 (+),score=195.18 R_Transcript_84562:2-2881(+)
KKKKKKKILSPSFKKTTYSQALKMDSSYQDQEDKSSPETFSDSSVPPDSPDTSDVFGEPLVHPRVGDEYQVEIPPLLHESELLHPQMNPALSEDVSDSSYSFLVGLPVPVMWVCDQATPIKNERMESACYPNALSTDGPVESENIAISRTSSLQKEPTVKVDPPDQTCVSNLYYIVPGLSTELWSDFEADCFLLGLYLFGKNLLQVRRFMDSKDMGQILAFYYGRFYGSAGYHKWSECRKMRSRKCVLGHKFFTGYRQQELFSRLFPRLSEESKTKLLEASRAFAEGRTSLDEYVSSIKTLVGINALVEAVGIGKGKEDLTTLFLDSSKNSQNRPEIPSGKACSSLTCAEIVQYLTGDFRLSKARSNDLFWEAVWPRLLARGWHSEQPRGDGYVGSKNSLVFLMPGIKKFSRRKLAKGDHYFDSVSDVLAKVASEPELLELEADEAKPSTSKEENGWAVEVTDDDQEPSDNERHCYLKPRVSGLSNLTKFTVVDTSLPHDDNPCKVRELRNLPLEAIRSTTLSRRSIKTGTELLDTANGLLNDYQQGSTSAHAKGPLNDVGENQRMQGNSVNPLKVPPNARLPTDHKSRAIKHQFSRRVKPGPSGSSGPVTKRRRLASCVDADLTYVLSLPAASKNGAFRGMSKNAALPKTSQPHVKALSIDVPAPRSSNKILKISFNGNRVDSRGVQDEKILRQHTVIDLNIPQVPIEPEIDNKVKLEVVENKANWQSGAEKPSNKMEGAENHDKRLCDAEKPKPKQKVEEGENNTNQHPHTEKPKKKHKVEEGQNTANQQSDAEKLKPKQKVEEGVNNTNQNSDAEKPKYCDPAVASSDMKEAPVSSPNKDVGFDQQPRRQSTRNRPLTTKALEALEIGFLNPVRHSRKRSPSTTQDQRSKRSRQPRPKSSMFPNVTSLEEPGADRTCNGKTDMLGSTPIVPVQIQKEAVSHELQELSKSSCPPAAP*

Click here to download the sequence:
Link to NCBI Protein BLAST