Transcript Information: R_Transcript_84748.p1


Annotated TAIR IDAT1G10320.1
Annotated Gene NameZinc finger C-x8-C-x5-C-x3-H type family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:3384164-3388373 | Reverse length=757
E-Value7.8E-195
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.7906826361944
Replicate 23.3650955520478
Replicate 34.3951979586297
Condition 2: 8 Hour
Replicate 14.1730988792709
Replicate 24.542842811979
Replicate 34.8349662600579
Condition 3: 24 Hour
Replicate 14.3790851258262
Replicate 24.1820355458431
Replicate 34.026744767454


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_84748.p1 GENE.R_Transcript_84748~~R_Transcript_84748.p1 ORF type:complete len:886 (+),score=215.95,zf-CCCH|PF00642.20|0.0004,zf-CCCH|PF00642.20|8.1e-07,RRM_5|PF13893.2|8.1e-08,RRM_1|PF00076.18|6.5e-06 R_Transcript_84748:266-2923(+)
ATGGCGGTGCCAGGAGGAGACGTTGAACCAGAGGAGAGAGAAATCCACAACAACAACAACGACATGAACGCCATGGGAGGGATGAGTAGTAGCAGTTGTAGTAGTAGGAAGGAGAAGAGAAAGGCGTTGAAGAAGATGAAGAGAAAGCAAGTGAGGAGAGAGAAAGCGATTAAAGAGAGAGAAGAGGAAGAAGCTCGAATGAATGATCCTGAGGAGCAGATGCGGTTGCTGAGATTAGAGCAAGAGGAAGCTGATAGAATGGAGAGAGATCGATTGGAGTTCGAGGAGAGAGAAAGGAAGTTTCTTCAGGAATTGGAGCTCAAGAAGAAACTCCAGGAGGAAGAGGAGCAGCAAAGGAAGCTTCTCGAAGAAGAATCTCGGAGGAATTCGGTTGACCACGAAAAAGCAGATGAGGTGAATGAAGGTGATGATTGGGAGTATGTAGAAGAAGGACCAGCAGAAATCATATGGAAAGGAAATGAGATCATAGTTAAGAAGAAAAAAGTCAGAGTACCTAAGAAACGTCCTGATCCACAAAATGAAAAACAGGAAAGTGAGAGACCGATTTCAAACCCTCTAGCTCTACAATCTGAAGCATTTGATGATTACAAGAGTGCACAGGAGGTTCTAGAAAGTGTCGCCCAACAATTCCCTAACTTTGGAACTGAACAGGATAAAGCACACTACCCCTTTCATCTCAAAACTGGGGTTTGCCGATTTGGGGCACGTTGCAGCAGAGTTCATTTCTATCCTGACAAATCTTGTACATTACTTATGAAGAACATGTACAATGGACCTGGCCTTGCCTGGGAGCAGGATGAGGGGCTTGAGTATACAGATGAGGAAGTTGAACGATCTTTTGAAGACTTCTATGAGGATGTACATACAGAATTTCTGAAGTTTGGAGAAATTGTGAACTTCAAGGTGTGCAAAAATGGTTCTTCTCATCTAAGGGGTAATGTATATGTCCATTATAAGTCATTGGAGTCAGCTGTGCTAGCATATCAGTCAATTAATGGTCGGTATTTTGCTGGGAAACAGATAAGCTGCGAATATGTTAATGTGACGAGATGGAAAGTTGCTATTTGTGGGGAGTATATGAAGTCGAGGCTCAAGGCATGTTCTCGTGGATCAGCTTGCAATTTTATACATTGTTTTCGAAATCCTGGTGGAGACTATGAATGGGCAGACTGGGATAAACCAGCTCCTAGGTACTGGCTGAAAAAGATGGCTTCTTTATTTGGATACACCAGCGACAGACACACAGATGAAGTGAGTCCAGGCTATCGTTCCAGAAGATCAAGGTCTCGGGGGTCTGACAGTGGTAACCGTTCTGATGACGATGATACTCGGGAGAGAGGACGCCTCTTGAAGCACAGAGGTGATAATAGAAAAGGATCTAGCTATCGTGAAGACAAAGTAAGCTCCCGGGGCAATCATCATCTCATCAAGCACCGAAAAACTGATGCTGCTTATATAACAGATTGGGGCTGTGATGATCGAAACACCTCTGCCTGCACAAAGAGAAGCTCAAGAAAGAGGGAAAGGGATACAGAGTTAACAAGACAAGGAAGGGATAGTGGAGACCGTGAAGTTTTTTCTGACAGAAGGCGGTGCAGTGAGGAGAAAGTGACTGACAGATACCAAAGCTCAAGTAGGAAGAAGAGTTCTTACACACACAGGCATCGCGATGAACAAGATAGACATACAGATAAACATTTATTGCCTAGAAACCACAAAGCTGATTCTTCTGACACCGACTCTCAGGAAGATAGGCTGGACAGATATCAATATAGGTGCCATAGACATACTAAGAAAAGCTCAAGACATATGAAAAAGGAATTATCAGACTTCACTTCTGATGGAGATCACCGTGTTAAGGATGAGAAAACACTTCAAAAGAAACATAGAAAAAATTCGAAGTCAAAAGACCCCTCTTCTGATGCTGAAAGCAGTGGAGAAAGTTTTGACAGGAAAGAGAGACATCATAAACATGAAAGGAGAAGCTCCAGACACCAGAGGAAGGAGCCTGGAGTGTTAAGAGCTGATTCTGATGCATTTAAGTGTCCTTTAAATAGAGTCAGGTCCAAAGAGGTCAAAAAAGACCACTCTGGAACTGATGTCGGATGCAAAAATTTACAAGCTGATTTGGAAAGAAATAATCCTGAGGAGGACGAGGTAGATGGAGGACACCACACATCTCATACCACAAATCTCATGCTGCACCCCAGGGATCATCATCTCCAAGAAGTTAACTTACATAGAAATACTGATGCGTATATATATCATGATTTTTGTGACGGAGGTCCTCATTCTGAAAGGGATCATAAAAGGTCTTATGCTGAAAGAAATCACGAGACAACTACATCTCAAAAGGTGGAGGCTGGTGATAGGCATACTAGTTTCCAGGATATGATTGGACAATCGAAGGATGATCTCGAGCAGGCATATCGCCTTGCTGCTTTAAAGAAGTTGGAGGAGATTAAAAAGTACAAGGATACACAGCCTGTGCATAGCAGGGAGCATGATGAAGGTTTAAAATACCACAGCCATGGGAGTATGGTTGAAGGGACAGAGGTCAGTAAAAATACGGAGAAACTTCTGGATTCAAGGAAATTGGAATCAGATGCTGCTGCAAGAAAGAGGAGAAGGATTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_84748.p1 GENE.R_Transcript_84748~~R_Transcript_84748.p1 ORF type:complete len:886 (+),score=215.95,zf-CCCH|PF00642.20|0.0004,zf-CCCH|PF00642.20|8.1e-07,RRM_5|PF13893.2|8.1e-08,RRM_1|PF00076.18|6.5e-06 R_Transcript_84748:266-2923(+)
MAVPGGDVEPEEREIHNNNNDMNAMGGMSSSSCSSRKEKRKALKKMKRKQVRREKAIKEREEEEARMNDPEEQMRLLRLEQEEADRMERDRLEFEERERKFLQELELKKKLQEEEEQQRKLLEEESRRNSVDHEKADEVNEGDDWEYVEEGPAEIIWKGNEIIVKKKKVRVPKKRPDPQNEKQESERPISNPLALQSEAFDDYKSAQEVLESVAQQFPNFGTEQDKAHYPFHLKTGVCRFGARCSRVHFYPDKSCTLLMKNMYNGPGLAWEQDEGLEYTDEEVERSFEDFYEDVHTEFLKFGEIVNFKVCKNGSSHLRGNVYVHYKSLESAVLAYQSINGRYFAGKQISCEYVNVTRWKVAICGEYMKSRLKACSRGSACNFIHCFRNPGGDYEWADWDKPAPRYWLKKMASLFGYTSDRHTDEVSPGYRSRRSRSRGSDSGNRSDDDDTRERGRLLKHRGDNRKGSSYREDKVSSRGNHHLIKHRKTDAAYITDWGCDDRNTSACTKRSSRKRERDTELTRQGRDSGDREVFSDRRRCSEEKVTDRYQSSSRKKSSYTHRHRDEQDRHTDKHLLPRNHKADSSDTDSQEDRLDRYQYRCHRHTKKSSRHMKKELSDFTSDGDHRVKDEKTLQKKHRKNSKSKDPSSDAESSGESFDRKERHHKHERRSSRHQRKEPGVLRADSDAFKCPLNRVRSKEVKKDHSGTDVGCKNLQADLERNNPEEDEVDGGHHTSHTTNLMLHPRDHHLQEVNLHRNTDAYIYHDFCDGGPHSERDHKRSYAERNHETTTSQKVEAGDRHTSFQDMIGQSKDDLEQAYRLAALKKLEEIKKYKDTQPVHSREHDEGLKYHSHGSMVEGTEVSKNTEKLLDSRKLESDAAARKRRRI*

Click here to download the sequence:
Link to NCBI Protein BLAST