Transcript Information: R_Transcript_8476.p1


Annotated TAIR IDAT3G52790.1
Annotated Gene Namepeptidoglycan-binding LysM domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:19566004-19566333 | Reverse length=109
E-Value2.8E-29
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.2365051919275
Replicate 27.4003353926296
Replicate 311.453368798076
Condition 2: 8 Hour
Replicate 112.04222866258
Replicate 210.6305831704
Replicate 312.795397650437
Condition 3: 24 Hour
Replicate 13.3872174598252
Replicate 26.5081091808261
Replicate 36.0998521258566


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_8476.p1 GENE.R_Transcript_8476~~R_Transcript_8476.p1 ORF type:complete len:122 (+),score=26.76 R_Transcript_8476:123-488(+)
ATGTCAAATCCACACACTTCAACTCTAGCAATGGCAGAGAAAATATCATGGTACTCATCCTTATTCTTAGCACTTTTGCTGGTTACAAGCTATTGTGAGACTAGCAATGGTGAGTATTTGATTGGTACGACGGCGACGGAGGCCGAAAATTGGCAATCTGTATCATTCTCAGTGGAGAAGATGATGATGATGAACAAGAACAAGCCTTGTGATGAGATTTATGTGGTTAAAGAAGGAGAAACTCTTCATTCAATTAGTGAAAAGTGTGGGGATCCTTTTATTATTGAAGAGAATCCCCATGTTAATGACATGGATGATGTCTTTCCTGGTCTTATTATCAAGATTACTCCTTACAAGAATAGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_8476.p1 GENE.R_Transcript_8476~~R_Transcript_8476.p1 ORF type:complete len:122 (+),score=26.76 R_Transcript_8476:123-488(+)
MSNPHTSTLAMAEKISWYSSLFLALLLVTSYCETSNGEYLIGTTATEAENWQSVSFSVEKMMMMNKNKPCDEIYVVKEGETLHSISEKCGDPFIIEENPHVNDMDDVFPGLIIKITPYKNR*

Click here to download the sequence:
Link to NCBI Protein BLAST