Transcript Information: R_Transcript_8478.p1


Annotated TAIR IDAT5G62150.1
Annotated Gene Namepeptidoglycan-binding LysM domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:24958325-24958633 | Forward length=102
E-Value2E-25
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 115.730193993497
Replicate 214.509638499068
Replicate 312.291420173545
Condition 2: 8 Hour
Replicate 122.296072147085
Replicate 230.905283845541
Replicate 336.450795310858
Condition 3: 24 Hour
Replicate 115.865151336218
Replicate 213.448328591815
Replicate 311.744622027116


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_8478.p1 GENE.R_Transcript_8478~~R_Transcript_8478.p1 ORF type:complete len:123 (+),score=25.00 R_Transcript_8478:123-491(+)
ATGTCAAATCCTTATACTTCAACTCTAGCAATGGCAGAGAAAATATCATGGTACTCATCCTTATTCTTAGCACTTTTGCTGGCTACAAGCTATTGTGAGAGTAGCAATGGTGAGTATTTGATTAGTACGACGGCGACCGAGGCCGAAAATTGGCGATCAACATCATCCTCAGTAGATAATATGATGATGATGATGAACAAGAACAAGCCTTGTGATGAGATTTATGTGGTTAAAGAAGGAGAAACTCTTCATTCAATTAGTGAAAAGTGTGGGGATCCTTTTATTATTGAAGAGAATCCCCATGTTAATGACATGGATGATGTCTTTCCTGGTCTTATTATCAAGATTACTCCTTACAAGAATAGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_8478.p1 GENE.R_Transcript_8478~~R_Transcript_8478.p1 ORF type:complete len:123 (+),score=25.00 R_Transcript_8478:123-491(+)
MSNPYTSTLAMAEKISWYSSLFLALLLATSYCESSNGEYLISTTATEAENWRSTSSSVDNMMMMMNKNKPCDEIYVVKEGETLHSISEKCGDPFIIEENPHVNDMDDVFPGLIIKITPYKNR*

Click here to download the sequence:
Link to NCBI Protein BLAST