Transcript Information: R_Transcript_84817.p1


Annotated TAIR IDAT1G22700.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:8028323-8029878 | Reverse length=301
E-Value2.7E-114
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.670832610441
Replicate 29.4165226109458
Replicate 311.175711372668
Condition 2: 8 Hour
Replicate 18.6071525269104
Replicate 210.435078192553
Replicate 39.4058345942005
Condition 3: 24 Hour
Replicate 18.0004479732908
Replicate 27.2180847278253
Replicate 38.5561027412417


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_84817.p1 GENE.R_Transcript_84817~~R_Transcript_84817.p1 ORF type:complete len:330 (+),score=89.64,TPR_2|PF07719.13|5.4e+03,TPR_2|PF07719.13|2.6,TPR_2|PF07719.13|0.00051,TPR_2|PF07719.13|2.8e-08,TPR_12|PF13424.2|7.4e-06,TPR_12|PF13424.2|1e-09,TPR_11|PF13414.2|7.6,TPR_11|PF13414.2|1.1e-12,TPR_1|PF00515.24|3.7e+03,TPR_1|PF00515.24|0.0015,TPR_1|PF00515.24|4.2e-09,TPR_8|PF13181.2|88,TPR_8|PF13181.2|0.039,TPR_8|PF13181.2|2.8e-07,TPR_16|PF13432.2|42,TPR_16|PF13432.2|11,TPR_16|PF13432.2|1.5e-08,TPR_17|PF13431.2|8.2,TPR_17|PF13431.2|0.00017,TPR_17|PF13431.2|1.2e+02,TPR_14|PF13428.2|7.6,TPR_14|PF13428.2|0.39,TPR_14|PF13428.2|0.033 R_Transcript_84817:156-1145(+)
ATGATCTCAACTGATAAAGTCCTCCATGTGGTTCCAGTCTTGGTGAATTCTCCTTCTCCTGGCAGAGCTTCTTCTTCTTCATCTTCTATGTTTGTGTCTCATTCTTCTGTTCTTGTTGCTTCATTGTCTATTCCCAAGTTCAAACTCTTGTCTTTCTCTTCAAATGATCCCCCTAACTTGAGCTCTTGGGATGGTCTTCTCATGCTTCAACGTTATAAATTTGGAAAGGCATTGATGTTGCAGCCTATTATATCTGTAAATCGTCAAGAATTCTGCAGGAAACCTTATGCTGTGAAGGATAAGGAAAATTTCAGAAGGTCACTAAGTGGTGTTGCTGCCTTCACATCTGCTACAGTCTCTTGGTTAGCTTCTTCACAGGTGGCGTACTCTGCCACTGACATCAAGATAGATCCGGTTTATGAGGTTGGTGAGTTGTTTGAATTAGGAATTCAGTTGTCATATTTACTTTTGCTACTGGCTTTGCTTGGAGTTGGAACCTTTTTTGTTATCCGCCAAGTGCTAGTTCGGCGAGAACTTGACCTTTCTGCCAAAGAACTGCAGGAGCAAGTTAGGAGCGGTGATGCTAGTGCTACTGAACTATTTGAACTTGGAGCAGTGATGCTGAGAAGAAAGTTCTATCCAGCTGCGACTAAATACTTGCTTCAGGCAATTGAGAAATGGGATGGAGATGATCAGGATCTTGCCCAGGTTTACAATGCATTGGGAGTCAGCTACATACTTGAAGGAAAACTTGAAAAGGGCATCTCCCAGTTTGAGAATGCTGTTAAGCTTCAGCCAGGATATGTCACAGCTTGGAACAACCTTGGTGATGCATATGAAAAGAAGAAAGATCTCAAATCTGCCCTCAAGGCATTTGAAGAAGCGCTGCTGTTTGATCCCAACAACAAGGTGGCACGGCCTCGAGTTGACTCATTGAGGGACCGTCTTAATATGTACAAAGGCGTTCCTGTGAAATCAAAGGAAAGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_84817.p1 GENE.R_Transcript_84817~~R_Transcript_84817.p1 ORF type:complete len:330 (+),score=89.64,TPR_2|PF07719.13|5.4e+03,TPR_2|PF07719.13|2.6,TPR_2|PF07719.13|0.00051,TPR_2|PF07719.13|2.8e-08,TPR_12|PF13424.2|7.4e-06,TPR_12|PF13424.2|1e-09,TPR_11|PF13414.2|7.6,TPR_11|PF13414.2|1.1e-12,TPR_1|PF00515.24|3.7e+03,TPR_1|PF00515.24|0.0015,TPR_1|PF00515.24|4.2e-09,TPR_8|PF13181.2|88,TPR_8|PF13181.2|0.039,TPR_8|PF13181.2|2.8e-07,TPR_16|PF13432.2|42,TPR_16|PF13432.2|11,TPR_16|PF13432.2|1.5e-08,TPR_17|PF13431.2|8.2,TPR_17|PF13431.2|0.00017,TPR_17|PF13431.2|1.2e+02,TPR_14|PF13428.2|7.6,TPR_14|PF13428.2|0.39,TPR_14|PF13428.2|0.033 R_Transcript_84817:156-1145(+)
MISTDKVLHVVPVLVNSPSPGRASSSSSSMFVSHSSVLVASLSIPKFKLLSFSSNDPPNLSSWDGLLMLQRYKFGKALMLQPIISVNRQEFCRKPYAVKDKENFRRSLSGVAAFTSATVSWLASSQVAYSATDIKIDPVYEVGELFELGIQLSYLLLLLALLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASATELFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYILEGKLEKGISQFENAVKLQPGYVTAWNNLGDAYEKKKDLKSALKAFEEALLFDPNNKVARPRVDSLRDRLNMYKGVPVKSKER*

Click here to download the sequence:
Link to NCBI Protein BLAST