Transcript Information: R_Transcript_84877.p1


Annotated TAIR IDAT5G49710.3
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G24590.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:20195561-20197188 | Forward length=235
E-Value2E-18
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.473289742966
Replicate 26.2988901248894
Replicate 38.1809777129116
Condition 2: 8 Hour
Replicate 17.870456590186
Replicate 29.7429556593737
Replicate 312.187509987974
Condition 3: 24 Hour
Replicate 110.98695060183
Replicate 26.4590401036691
Replicate 38.9114226225225


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_84877.p1 GENE.R_Transcript_84877~~R_Transcript_84877.p1 ORF type:3prime_partial len:140 (-),score=25.71 R_Transcript_84877:2-418(-)
ATGGAGATGGGAGAAGGGAGTGAATCGTCTTCACCGCAAATTGGGAGGAGAGAGAAACAGAAAGATAAAGAACAACTCAGAGTTAAAAGGAAGACTTTAAAGGCTGTGCTTGAGCAGTGCCAAAGAGCTCTCGAATCCCTAGACATCGATTCTTCCGAACAAGACGATGACGACGATAATATTACCGATGATGACGTTGATCGTCAGGGATTTGACGACAGAGAGTCTTGTGATGGATCGTCTTCTCCCTGTACAGATCGTGAGGCCGAACAACTGTGTGTTATGATCAAATCTAGGGTGGACGGACCGGAATTCATTGAAAAGTTGGAAACTGCTCGAATTTCCGCTCAACAGACTGTTCCCGAAGAGGGCGGTTCTTGGGACGTGGTGAGCCATAGTGATTTATGGGAAGGTGGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_84877.p1 GENE.R_Transcript_84877~~R_Transcript_84877.p1 ORF type:3prime_partial len:140 (-),score=25.71 R_Transcript_84877:2-418(-)
MEMGEGSESSSPQIGRREKQKDKEQLRVKRKTLKAVLEQCQRALESLDIDSSEQDDDDDNITDDDVDRQGFDDRESCDGSSSPCTDREAEQLCVMIKSRVDGPEFIEKLETARISAQQTVPEEGGSWDVVSHSDLWEGG

Click here to download the sequence:
Link to NCBI Protein BLAST