Transcript Information: R_Transcript_84885.p1


Annotated TAIR IDAT5G67385.1
Annotated Gene NamePhototropic-responsive NPH3 family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:26884754-26887083 | Forward length=604
E-Value2.5E-105
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.71199493085782
Replicate 20.074454966015241
Replicate 30.81229565943803
Condition 2: 8 Hour
Replicate 10.17365861664713
Replicate 20.079293907238247
Replicate 30.51493930837977
Condition 3: 24 Hour
Replicate 10.24423199178409
Replicate 20.46926082745909
Replicate 30.69854376660311


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_84885.p1 GENE.R_Transcript_84885~~R_Transcript_84885.p1 ORF type:complete len:282 (+),score=33.22,NPH3|PF03000.10|1.8e+03,NPH3|PF03000.10|3e-11,BTB|PF00651.27|1.7e-08 R_Transcript_84885:440-1285(+)
ATGATATTCTCCCAGGAAATTCCTAGTGATGTTACTATTCAAATTGGTGACGTTTCCTTTTCCTTACACAAGTTCCCGCTAGTGTCGAAAAGTGGACGAATAAGGAAATTGTTGTCAGAATGTAACAGTACTGATCTTTCAGTCATTGAACTCTCGGACATTCCGGGAGGGCCAGAAGCTTTTGAAGTAGCGGCAAAATTCTGTTATGGGATAAACTTTGAAATTAGCACTGAGAATATTGCCATGCTTCGCTGTGTGGCTGAGTATCTCGAGATGACAGAGGATAATGCGGTTGGAAACCTTATTGGAAGGGCAGAGGCTTACTTGAATGAAGTAGCTCTTAAGAGCCTATCCACTTGTGTTTCGGTTCTGCTTGCCTCGGAAAACCTCCTGCCTATGGCAGAGCAAATTAAGTTGGTGGGCCGTTGCATTGATGCAATAGCTTATTTAGCCTGCAAGGATAGCCAATTTTCAGGTACGAGCAGGGCTGAAGCTGGCATTGAAGGTGGAAACTCCTCGTTAGTTCCTCAACAAAAACCCATTGTGGATTGGTGGGCTGAAGATGTGACTATGCTTAGAATAGATATGTTCCAAAGGGTTCTGATAGCTATGACGGCTAGAGGATTTAAGCAATATGCTCTTGGTCCCATCCTCATGCTCTATGCTCAAAAGTCTCTAAGAGGTTTGGTGAGATGCCTTCCTAAATCTGTTAATTGCTTTTTTATTTTGTATCTTCTGATCTTTAGCTCTTTTGTTTCTCCAGACGAAAATTTTTGTGGTAGTTTTCTGAGACAAATAAAACTTTTTACACACTATTTTGCACATTTTTACGCGGTCATACAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_84885.p1 GENE.R_Transcript_84885~~R_Transcript_84885.p1 ORF type:complete len:282 (+),score=33.22,NPH3|PF03000.10|1.8e+03,NPH3|PF03000.10|3e-11,BTB|PF00651.27|1.7e-08 R_Transcript_84885:440-1285(+)
MIFSQEIPSDVTIQIGDVSFSLHKFPLVSKSGRIRKLLSECNSTDLSVIELSDIPGGPEAFEVAAKFCYGINFEISTENIAMLRCVAEYLEMTEDNAVGNLIGRAEAYLNEVALKSLSTCVSVLLASENLLPMAEQIKLVGRCIDAIAYLACKDSQFSGTSRAEAGIEGGNSSLVPQQKPIVDWWAEDVTMLRIDMFQRVLIAMTARGFKQYALGPILMLYAQKSLRGLVRCLPKSVNCFFILYLLIFSSFVSPDENFCGSFLRQIKLFTHYFAHFYAVIQ*

Click here to download the sequence:
Link to NCBI Protein BLAST