Transcript Information: R_Transcript_84922.p1


Annotated TAIR IDAT1G70070.1
Annotated Gene NameDEAD/DEAH box helicase, putative
Annotated Gene Symbol(s)EMB25, PDE317, ISE2
Annotation TypeOrtholog
Chromosome Positionchr1:26390016-26394148 | Reverse length=1171
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.3312805106593
Replicate 21.8188552925809
Replicate 32.2155381190559
Condition 2: 8 Hour
Replicate 13.9951705633016
Replicate 24.5135505819046
Replicate 35.9385841306396
Condition 3: 24 Hour
Replicate 13.6493066156737
Replicate 22.9679069995731
Replicate 34.3075886431741


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_84922.p1 GENE.R_Transcript_84922~~R_Transcript_84922.p1 ORF type:5prime_partial len:1189 (+),score=246.06,DSHCT|PF08148.8|37,DSHCT|PF08148.8|1e-33,DEAD|PF00270.25|1.1e-20,DEAD|PF00270.25|1.5e+03,ResIII|PF04851.11|8.3e-08 R_Transcript_84922:3-3569(+)
AGCTCAGAAATTCACTTTCGCGCCATGAACGCGAAAGCTCTATCTCTCTTCTCTCCCCTTTCTCTATCCTCTTCCTCATCCATTCTTCTCTCTCCACCTCCTTCAAAATTCATCAACCCTCTCTCACTCCTCCATTTCCACCACAACCAATTACCAAAACTAGGGTTCTGCTCTCCTAAAACACTTCACCCTCACTCTCATTCTCATCCTTTCTTCAAATCTCCAAACTCGATCTCCTCCGTCGAAAACCAGCTCTCCGAGGAGGAAGACGAAGAAGAAGAATACGAAGATGAAGACGACGAAGCCGCCGAAGAATACGACGATGTCACAACCGACGCCATTGAAGCATCTGTCCATGATTCGGAGGTTGAAGATGAAGTTGATGCGACGTCATTTTTGAGTGGAAACGAGTCGAAGTTGCTGAGAGTTCAGAAGTTGTGTGACGAAGTGAGAGAGTTCGGTGCGGGGATTATTGATGCTAATGAACTCGCCTCTATTTATGATTTCCGTATCGACAAATTCCAGAGATTAGCGATAAAAGCGTTCCTAAGAGGTTCGTCAGTGGTGGTTTCCGCTCCTACTAGTAGTGGCAAGACCTTGATCGCAGAAGCTGCGGCTGTGGCTACCGTTGCAAGAGGAAAGCGGTTGTTCTACACTACTCCTCTTAAAGCGTTGTCGAATCAGAAGTTTCGAGAATTTCGGGATACATTTGGTGAGAGCAATGTTGGGCTTTTGACTGGAGATTCGGCTGTTAATAAAGATGCTCAAGTTTTGATTATGACTACAGAGATTCTTCGGAATATGTTGTATCAGAGCGTAGGAGTTGTTTCTTCTGGGAGCGGTCTATTCGATGTTGATGTGATTGTTTTGGATGAAGTACATTACCTAAGTGACATGTCTCGGGGCACAGTATGGGAGGAGACAGTCATTTATTGCCCCAAAGAAGTTCAGCTTATATGTCTATCAGCAACTGTTGCAAACCCAGATGAGCTAGCTGGTTGGATTGGACAGATACATGGTAAAACAGAATTGGTCACATCTTCAAGACGACCGGTACCTTTGACATGGCATTTTTCTACGAAGACCTCTTTGTTTCCTCTCCTTGATGAGAAAGGAACAAGCATGAACAGGAAGCTCTCACTTGGCTATCTACGCCTTTATGCTTCAGGAGCTCAATCTCGAAGAGATGAAGGTTCTAGGCGGAGAAATTCCAAAAGACATACAGATGAAAGTGATTTGGTCTATGAGGAGTATGGTAGATCATCTGGCTCTCTTTCAAAAAATGACATAAACATGATCCGGCGCTCACTGGTTCCTCAAGTTGAAGATACATTGGAGCATCTTAAAGGAAGGGATATGCTGCCTGCAATTTGGTTTATTTTTAGCAGAAAAGGTTGTGATGCAGCTGTTCAATATCTTGAAAAGTCTAAGCTTCTGGATGAATGTGAGAGGGCTGAGTTAGAACTAGCTTTAAAGCGATTCCGTATTCAGTATCCTGATGCTGTCAGGGAATCAGCAGTGAAGGCGCTTTTACAAGGCGTTGCGGCACATCATGCTGGCTGTCTGCCCCTCTGGAAATCATTTATAGAAGAGCTTTTTCAGCGAGGCCTCGTCAAGGTTGTTTTCGCCACAGAAACACTTGCTGCAGGGATTAATATGCCTGCTAGAACATCCGTTATTGCTTCTCTTAGCAAAAGAAGTGAAGCAGGTCGCGTGCAATTAAGATCTAACGAGCTGCTTCAGATGGCTGGTCGTGCTGGACGTCGAGGTATAGATGATAGGGGTCATGTAGTGCTTGTTCAAAGTCCTTACGAAGGCGCTGAAGAGTGCTGTGAGCTTCTGTTTTCTGGCGTTGAACCTCTTGTTTCACAGTTTACAGCTTCCTATGGAATGGTTTTGAACCTTCTTGCGGGTGCAAAAGTTACCCGTAAGTCCAATGAAGCAGATGGTGTCAAGGTTTCTCAAGCAGGACGAACTTTAGACGAAGCAAGGAAGCTAGTTGAGCAAAGTTTCGGGAACTATTTAGGGAGCAATGTTATGCTTGCCTCAAAAGAGGAGCTTGACAGAATACAGAAAGAGATTGAATTATTATCAGCAGAAGTCACTGATGACGCCATTGATAGGAAAGTCCGAAAACTGTTGTCAGAATCAGCATACATGGAGATTGCTACTTTGCAGGAAGAACTGAGGGAAGAAAAACGTCTACGAGTTGAATTGCGGCGAAGGATGGAATTGCAGAGAATGTCTTCACTGAAACCTTTATTGAAGGAGTTGGGAAATGGGCAATTACCTTTTCTCTGTTTGCAGTATAAGGATACTGATGGGATTGAGCATTCAATTTTAGCTGTATATCTGGCTGAGGTTGATTCACTTGATGGATCCAATATAAAGAATATTGTTCAGGCTGATGGGTCTTTTAAGTTGAACATACAAGAAGTAGAGCTAAATACTGGTGGTTCTGAACCACTGCCTTATTTTGAGCCCTCTTATCATTTGGCTCTTGGTTCAGATAATTCTTGGTATCTTTTCACTGAGAAATGGATCAAAACAGTCTATAAAACAGGTTTCCCAAATATGGCACTTACTGAAGGTGATCCTTTGCCTCGGGAGATTATAAGCCGGCTTCTTGATAAGGAGGGAATGCAATGGGCCAGGCTTGTTGATTCCGAACTTGGGGGTTTATGGCAGATGGATGGATCCCTGGAGACATGGTCTTGGAGTTTAAATGTGCCAATGTTGAGTAGCCTTCCGGACGACGTTAAGGCATCACACATGTCGCCAGAATACGTTGAAGCAGTAGAATGCTACAGAAAACAAAGAAATAAAGTTTCACACTTGAAGAAAAAGATCACACGTACAGAAGGATTTAGAGAGTACAAGAAGATTGTGGATATGGCTAAGCTTACTGAAGGAAAGATTAGGCGCCTGAAGAGTAGAGAAAAACGCTTGATCGATCGAATCGAGCAGATAGAACCGTCAGGCTGGAAAGAGTTCTTGCAGATAAGCAACGTGATCCATGAAAGTAGGGCGTTGGATATCAACACAAATGTGATATTTCCTCTTGGTGAAACTGCATCTGCAATACGAGGAGAAAATGAACTTTGGCTTGCTATGGTTCTGCGGAACAGAGTACTGCTCGACCTAAAACCTGCACAGCTAGCTGCTGTTCTTGGGAGCTTAATTTCTGAAGGGATAAAAATTCGGCCATGGAAGAATAATTGTTTTATATATGAGCCTTCCTCCACTGTAATCAACGTTATAAGTTTTCTGGAGGAGCAAAGAAATTACCTTTTGGAGCTTCAAAATAAACATGGTGTGCAGATATCTTGCTGCTTAGATAGTCAATTTGCTGGTATGGTTGAAGCCTGGGCCTCTGGTTTGACATGGCGGGAAGTTATGATGGATTGTGCAATGGATGAGGGAGATTTAGCTCGTCTCTTACGGCGGACAATTGATCTGTTAGCTCAAATTCCTAAGTTGCCAGATATTGATCCAGTGTTGCAGAGCAATGCAATGACTGCATCAGGTGTCATGGACCGTTCGCCAATCAGTGAGCTAGCTGGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_84922.p1 GENE.R_Transcript_84922~~R_Transcript_84922.p1 ORF type:5prime_partial len:1189 (+),score=246.06,DSHCT|PF08148.8|37,DSHCT|PF08148.8|1e-33,DEAD|PF00270.25|1.1e-20,DEAD|PF00270.25|1.5e+03,ResIII|PF04851.11|8.3e-08 R_Transcript_84922:3-3569(+)
SSEIHFRAMNAKALSLFSPLSLSSSSSILLSPPPSKFINPLSLLHFHHNQLPKLGFCSPKTLHPHSHSHPFFKSPNSISSVENQLSEEEDEEEEYEDEDDEAAEEYDDVTTDAIEASVHDSEVEDEVDATSFLSGNESKLLRVQKLCDEVREFGAGIIDANELASIYDFRIDKFQRLAIKAFLRGSSVVVSAPTSSGKTLIAEAAAVATVARGKRLFYTTPLKALSNQKFREFRDTFGESNVGLLTGDSAVNKDAQVLIMTTEILRNMLYQSVGVVSSGSGLFDVDVIVLDEVHYLSDMSRGTVWEETVIYCPKEVQLICLSATVANPDELAGWIGQIHGKTELVTSSRRPVPLTWHFSTKTSLFPLLDEKGTSMNRKLSLGYLRLYASGAQSRRDEGSRRRNSKRHTDESDLVYEEYGRSSGSLSKNDINMIRRSLVPQVEDTLEHLKGRDMLPAIWFIFSRKGCDAAVQYLEKSKLLDECERAELELALKRFRIQYPDAVRESAVKALLQGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATETLAAGINMPARTSVIASLSKRSEAGRVQLRSNELLQMAGRAGRRGIDDRGHVVLVQSPYEGAEECCELLFSGVEPLVSQFTASYGMVLNLLAGAKVTRKSNEADGVKVSQAGRTLDEARKLVEQSFGNYLGSNVMLASKEELDRIQKEIELLSAEVTDDAIDRKVRKLLSESAYMEIATLQEELREEKRLRVELRRRMELQRMSSLKPLLKELGNGQLPFLCLQYKDTDGIEHSILAVYLAEVDSLDGSNIKNIVQADGSFKLNIQEVELNTGGSEPLPYFEPSYHLALGSDNSWYLFTEKWIKTVYKTGFPNMALTEGDPLPREIISRLLDKEGMQWARLVDSELGGLWQMDGSLETWSWSLNVPMLSSLPDDVKASHMSPEYVEAVECYRKQRNKVSHLKKKITRTEGFREYKKIVDMAKLTEGKIRRLKSREKRLIDRIEQIEPSGWKEFLQISNVIHESRALDINTNVIFPLGETASAIRGENELWLAMVLRNRVLLDLKPAQLAAVLGSLISEGIKIRPWKNNCFIYEPSSTVINVISFLEEQRNYLLELQNKHGVQISCCLDSQFAGMVEAWASGLTWREVMMDCAMDEGDLARLLRRTIDLLAQIPKLPDIDPVLQSNAMTASGVMDRSPISELAG*

Click here to download the sequence:
Link to NCBI Protein BLAST