Transcript Information: R_Transcript_85068.p1


Annotated TAIR IDAT3G50360.1
Annotated Gene Namecentrin2
Annotated Gene Symbol(s)ATCEN2, CEN1, CEN2
Annotation TypeOrtholog
Chromosome Positionchr3:18674421-18675502 | Forward length=169
E-Value2.5E-95
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1108.0968765522
Replicate 2106.99312367826
Replicate 3109.73287471211
Condition 2: 8 Hour
Replicate 1104.54144734962
Replicate 2117.02641155207
Replicate 3107.1705872557
Condition 3: 24 Hour
Replicate 1101.86667757921
Replicate 294.296136813606
Replicate 3102.36106203872


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_85068.p1 GENE.R_Transcript_85068~~R_Transcript_85068.p1 ORF type:complete len:167 (+),score=50.53,EF-hand_1|PF00036.28|1.6e-08,EF-hand_1|PF00036.28|8.9e-09,EF-hand_1|PF00036.28|4e-06,EF-hand_1|PF00036.28|2.6e-07,EF-hand_6|PF13405.2|1.1e-09,EF-hand_6|PF13405.2|0.0015,EF-hand_6|PF13405.2|8.1e-06,EF-hand_6|PF13405.2|0.0052,EF-hand_7|PF13499.2|7.8e-15,EF-hand_7|PF13499.2|5.2e-13,EF-hand_8|PF13833.2|0.0012,EF-hand_8|PF13833.2|6e-09,EF-hand_8|PF13833.2|0.72,EF-hand_8|PF13833.2|2.4e-10,EF-hand_5|PF13202.2|5.7e-06,EF-hand_5|PF13202.2|0.00097,EF-hand_5|PF13202.2|0.0002,EF-hand_5|PF13202.2|0.0095,EF-hand_9|PF14658.2|2.7e-06,EF-hand_9|PF14658.2|0.0068,EF-hand_4|PF12763.3|0.046,EF-hand_4|PF12763.3|0.046,EF-hand_4|PF12763.3|0.38,SPARC_Ca_bdg|PF10591.5|0.0069,SPARC_Ca_bdg|PF10591.5|0.013 R_Transcript_85068:258-758(+)
ATGTCAAGTGCTAGGTCAACAAGGAAAGACAAGCCACGAGGGCGCCATGGTCTAACTCAGCAAAAGAAACAAGAGATCAGGGAAGCTTTTGAGCTATTTGACACAGATGGCTCAGGAACCATTGATGCCAAGGAATTGAATGTTGCTATGAGGGCCCTTGGTTTTGAGATGACAGAAGAGCAAATCAACCAAATGATTGCAGATGTGGACAAAGATGGAAGTGGTGCCATTGATTTCGATGAGTTCTGCCACATGATGACTGCGAAAATTGGAGAAAGGGACACGAAGGAGGAGCTTATGAAAGCATTTCGTATAATTGACCAAGATAATAATGGAAAGATATCTCCACAAGATATTCAACGTATTGCCAAGGAATTGGGTGTAAACTTCACCGATAGGGAGATCCTGGAGATGGTTGAAGAAGCAGACCGAGATCATGATGGGGAGGTCAACGTGGAAGAGTTTCTGAGAATGATGAAGAGAACTTCGTATGCATACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_85068.p1 GENE.R_Transcript_85068~~R_Transcript_85068.p1 ORF type:complete len:167 (+),score=50.53,EF-hand_1|PF00036.28|1.6e-08,EF-hand_1|PF00036.28|8.9e-09,EF-hand_1|PF00036.28|4e-06,EF-hand_1|PF00036.28|2.6e-07,EF-hand_6|PF13405.2|1.1e-09,EF-hand_6|PF13405.2|0.0015,EF-hand_6|PF13405.2|8.1e-06,EF-hand_6|PF13405.2|0.0052,EF-hand_7|PF13499.2|7.8e-15,EF-hand_7|PF13499.2|5.2e-13,EF-hand_8|PF13833.2|0.0012,EF-hand_8|PF13833.2|6e-09,EF-hand_8|PF13833.2|0.72,EF-hand_8|PF13833.2|2.4e-10,EF-hand_5|PF13202.2|5.7e-06,EF-hand_5|PF13202.2|0.00097,EF-hand_5|PF13202.2|0.0002,EF-hand_5|PF13202.2|0.0095,EF-hand_9|PF14658.2|2.7e-06,EF-hand_9|PF14658.2|0.0068,EF-hand_4|PF12763.3|0.046,EF-hand_4|PF12763.3|0.046,EF-hand_4|PF12763.3|0.38,SPARC_Ca_bdg|PF10591.5|0.0069,SPARC_Ca_bdg|PF10591.5|0.013 R_Transcript_85068:258-758(+)
MSSARSTRKDKPRGRHGLTQQKKQEIREAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDFDEFCHMMTAKIGERDTKEELMKAFRIIDQDNNGKISPQDIQRIAKELGVNFTDREILEMVEEADRDHDGEVNVEEFLRMMKRTSYAY*

Click here to download the sequence:
Link to NCBI Protein BLAST