Transcript Information: R_Transcript_85132.p1


Annotated TAIR IDAT5G48800.1
Annotated Gene NamePhototropic-responsive NPH3 family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:19786881-19789003 | Forward length=614
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 120.538291025472
Replicate 28.2960991888788
Replicate 312.179679990149
Condition 2: 8 Hour
Replicate 18.1221405678667
Replicate 29.3079443111277
Replicate 310.123581207793
Condition 3: 24 Hour
Replicate 111.422908962077
Replicate 26.3834733049151
Replicate 316.157752728214


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_85132.p1 GENE.R_Transcript_85132~~R_Transcript_85132.p1 ORF type:complete len:615 (+),score=106.43,NPH3|PF03000.10|3.7e+03,NPH3|PF03000.10|1.4e-85,BTB|PF00651.27|4.4e-06 R_Transcript_85132:337-2181(+)
ATGGACAGGAGTGATAAGCAGCAACTTCCCCTTCCCAAAGCCTCTCGCCAGCGCTGTAATGAATGGATATTTAGGGATGTCCCAAGTGATATCACTATTGAAGTGATCGGAGGGACATTTGCACTTCATAAGTTCCCTCTGGTCTCTCGAAGTGGAAGAATACGCAAGTTAGTGGCAGAGCACCGGGATTCAGACATGACAAAGGTCGAACTCCACAACCTACCTGGGGGTGCAGAAGCATTCGAGCTGGCAGCAAAGTTTTGCTACGGGATCAACTTTGAGATCACGCCTGCCAATGTCGCTCAGCTCTGTTGTGTCTCTGACTACCTTGAGATGACAGACAATTATACGAAAGATAGCCTGGGATCTCGAGCTGAAGAGTACCTTGAGAGTGTTGTCTGCAAGAACCTAGAAATGTGTGTGGAAGTCCTAAAGCAATGTGAAAACCTTCTCCCACTTGCTGACGAGCTGAAAATAGTTAGCAGGTGCATTGACGCTATAGCCTCCAAGGCGTGTGCTGAGCAAATAGCTTCAAGCTTCTCGAGGCTGGAATATAGCAGCTCCGGTAGGCTTCACATGAGCCGTCCTGTCAAATGTGAAGGCGACTGGTGGATAGAGGATCTTTCGATTCTCCGAGTAGATTTGTATCAGAGGGTTATAACTGCAATGAAATGTAGAGGGGTTAGGCCGGAGAGTATTGGTGCTTCACTGATAAATTATGCAGAAAAAGAGCTGACAAAAAAAGTGAGTTCATGGAATGCTAGTTCTGGTCAATCAAGACCTGATGTCATTTCTGAGTCTGGTAACCAAGAAAGAATCGTGGTCGAAACAATTATCAGTCTTTTGCCTGTAGAGAAACTAGTTGTGTCAATCAGTTTCCTGTTTGGACTCCTCCGAAGTGCTATTTTGCTCGACTGTTCTGTTGCCAGCAGGCTTGATCTCGAGAGGAGGATTGGCTCTCAGTTAGATCTAGCCACTCTCGATGACCTTTTGATCCCTTCATTTCGACATGCTGGAGATACTTTATTTGACATGGACACGGTCCATAGGATCCTGGTGAGCTTCTCCCAGCAAGATGATAGTGAAGACGAGCTGGACGATGCCTCGGTTTTTGAATCAGATAGTCCTCAGTCACCTTCACAAGGTGCCTTGTATAAGGTCTCGAAAATGGTGGACAATTACCTTGCTGAGATTGCACCAGATGCAAACCTCAAGCTCAACAAGTTCATGTTCATCGCAGAAGCTTTGCCAGCCCATGCACGAACTATTCATGATGGGTTATATCGTGCCATCGACATATATCTCAAGGCACACCCGGGATCACCAGATGCAGAGAAGAGGAAGCTCTGCAAGCTGATAGACTTCCAGAAGCTGTCACAAGAAGCAGGTGCACACGCAGCCCAAAACGAGAGGCTTCCACTCCAATCAATAGTACAAGTGCTGTACTTTGAGCAACTAAGACTCCGGAATGCACTATCCTGCTCTTTCCCAGAAGAGGAACCTAAGCCGATGTTTCACTCATGGCGTGTCAACAGTGGAGCTCTCAGTGCATCAATGTCTCCTAAAGACAACTACGCGTCACTAAGGAGAGAGAATCGGGAGCTGAAGTTGGAACTAGCTCGCATGAGAATGAGACTTAATGATCTCGAGAAGGAGCATGTCTGTATGAAGAGGACCATGGAGAAATCTGGTTCTCGTAAATTTATGAGCTCTTTCTCGAAGAAGATTGGGAAGCTGAGCTTCTTTGCACATAGTTCTTCTAGGGAATCACGTGGATCGAGTTCTCCTTCCCCTTCAAGGCAATCACAGAGGACAGACTCTAAGGTGACTGATAGAACATATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_85132.p1 GENE.R_Transcript_85132~~R_Transcript_85132.p1 ORF type:complete len:615 (+),score=106.43,NPH3|PF03000.10|3.7e+03,NPH3|PF03000.10|1.4e-85,BTB|PF00651.27|4.4e-06 R_Transcript_85132:337-2181(+)
MDRSDKQQLPLPKASRQRCNEWIFRDVPSDITIEVIGGTFALHKFPLVSRSGRIRKLVAEHRDSDMTKVELHNLPGGAEAFELAAKFCYGINFEITPANVAQLCCVSDYLEMTDNYTKDSLGSRAEEYLESVVCKNLEMCVEVLKQCENLLPLADELKIVSRCIDAIASKACAEQIASSFSRLEYSSSGRLHMSRPVKCEGDWWIEDLSILRVDLYQRVITAMKCRGVRPESIGASLINYAEKELTKKVSSWNASSGQSRPDVISESGNQERIVVETIISLLPVEKLVVSISFLFGLLRSAILLDCSVASRLDLERRIGSQLDLATLDDLLIPSFRHAGDTLFDMDTVHRILVSFSQQDDSEDELDDASVFESDSPQSPSQGALYKVSKMVDNYLAEIAPDANLKLNKFMFIAEALPAHARTIHDGLYRAIDIYLKAHPGSPDAEKRKLCKLIDFQKLSQEAGAHAAQNERLPLQSIVQVLYFEQLRLRNALSCSFPEEEPKPMFHSWRVNSGALSASMSPKDNYASLRRENRELKLELARMRMRLNDLEKEHVCMKRTMEKSGSRKFMSSFSKKIGKLSFFAHSSSRESRGSSSPSPSRQSQRTDSKVTDRTY*

Click here to download the sequence:
Link to NCBI Protein BLAST