Transcript Information: R_Transcript_85155.p1


Annotated TAIR IDAT5G01660.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Development/cell death domain (InterPro:IPR013989), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: DCD (Development and Cell Death) domain protein (TAIR:AT3G11000.1); Has 16133 Blast hits to 7053 proteins in 482 species: Archae - 40; Bacteria - 1227; Metazoa - 10756; Fungi - 311; Plants - 1896; Viruses - 673; Other Eukaryotes - 1230 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:244504-248442 | Reverse length=656
E-Value6E-184
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 115.187788994093
Replicate 210.482267983931
Replicate 313.168775017455
Condition 2: 8 Hour
Replicate 113.817288389293
Replicate 214.072809146646
Replicate 315.405527319269
Condition 3: 24 Hour
Replicate 115.52517372282
Replicate 212.112040812828
Replicate 314.039919496588


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_85155.p1 GENE.R_Transcript_85155~~R_Transcript_85155.p1 ORF type:complete len:661 (+),score=128.81,Kelch_1|PF01344.21|0.064,Kelch_1|PF01344.21|6.3e-12,Kelch_1|PF01344.21|1.5e-07,Kelch_1|PF01344.21|6e-13,Kelch_1|PF01344.21|1.2e-09,Kelch_1|PF01344.21|0.051,Dev_Cell_Death|PF10539.5|7.2e-53,Kelch_6|PF13964.2|2,Kelch_6|PF13964.2|3.1e-09,Kelch_6|PF13964.2|1.7e+02,Kelch_6|PF13964.2|7.9e-06,Kelch_6|PF13964.2|0.0099,Kelch_6|PF13964.2|3.2,Kelch_2|PF07646.11|17,Kelch_2|PF07646.11|0.00079,Kelch_2|PF07646.11|1.7,Kelch_2|PF07646.11|8.3e-05,Kelch_2|PF07646.11|0.0049,Kelch_2|PF07646.11|7.4,Kelch_4|PF13418.2|6.2,Kelch_4|PF13418.2|0.00046,Kelch_4|PF13418.2|15,Kelch_4|PF13418.2|0.0052,Kelch_4|PF13418.2|0.023,Kelch_4|PF13418.2|65,Kelch_3|PF13415.2|1,Kelch_3|PF13415.2|2.4,Kelch_3|PF13415.2|1.8,Kelch_3|PF13415.2|1.2e-05,Kelch_3|PF13415.2|6.1,Kelch_3|PF13415.2|2.4e+03,Kelch_5|PF13854.2|6.3e+02,Kelch_5|PF13854.2|0.31,Kelch_5|PF13854.2|83,Kelch_5|PF13854.2|96,Kelch_5|PF13854.2|0.0045,Kelch_5|PF13854.2|2.6 R_Transcript_85155:353-2335(+)
ATGGCTACTGGGAAGAGAACACAAAAGTCTAATGGAAGTACATTTGCCAGTTCAAGTACAACAGCTTCTGCTTCTATTAGTAGAAATTTGAAGACCAGTGATTTGGGTGGTGTCATTTTCGGTTGCACAGACAGCACCATGAAAGAATGCCTTACGAAACAGCTCTTTGGGTTACCACAGCAACACTTCACATATGTGAAGAACATCCGCCCAGGTTTGACATTGTTTCTGTTCAACTACAGTAGAAGGGCACTTCATGGCATCTATGAGGCCGCTAGCTGTGGTCAGTTGAATATTGATCCATATGGTTGGACAGTTAATGGGTCACAGAGAACATCATATCCTGCACAGGTTCAAATCCGTGTTCGAAAGGATTGTCGTCCTCTGGTAGAGAACCAGTTTAAACCAGTCATCAAACGAAATTATTATTCACATAATCACTTCTCTTTTGAGCTGGACCATGCTCAAGTCAGCCAGTTAATCACTTTATTTTCAAACCAAGAGGTTGTAGTTGCACCCTCTTACTCTGTTCACAGAAATACAGGAAACTGGCAGATAGTAGTTCATCGTCAACCCGAACTCAAACATAGAGAGGAAGAAGGAAACTCTACTTCTCACAACCATTCAAATGGGCATTTGAGCCCCAAAGATCCGTCTTCGTGCCTTGACGGAGTCAACCACTCGATCGGATCTGTGATTGAAAGAATGGAAAAGGATGAGACCAAGCGGATATATGAAAAATTGCAAAAGTTGGCAGTGATCTGTGAGCCATCAGATTCTTCTCTTTCAAATCAAGTACAGGAGTCAGCTGACGACCCTAAGTTGCATATTGAGGATGAAGGTTCACAAAAAATAAAAATGATACAAGATGAGAATGCTAATGAAAGCCCTTTTTCATCAGATTTTCTATCTGTCATAACTCAGTTGGTGCAAGAAGTGCAAGAACTTAAGGCATTCAAGCAAGAACAAATTGAAAGGAATAGCCAATTAGAGGAAAAGCTGGTAAAATCTGAATCAGAAGTCCAACAGTTAAGAGATCGTTGTACTATGTTGGAGTCCTTCTCTAACTATTCGGAGGCATATACATGTGGAACAATAATGGAGCCATGCATTGAGCAGCACTTGGACCTAGAAGATACTGTTCTCCTAGCAGGAGGATATAACGGGCAAGCTTGGCTATCATCATTAGATTGTTATTCTCCATCAAAGGATGTAATTAAATCTCTAAGGCCTATGAGCTCAGTTCGTTCATATGCCTCTATTGCAAAGTTGAATGGTGACATTTATGTAATTGGAGGTGGAAATGATTCTTCGTGGTATGATACAGTGGAATGCTACAATTTTGAAAATGACAAGTGGACATCACTCCCTCGTTTGAATGGGGAAAAGGGGAGCTTAGCCGCAACAACATTGCATGACAAAATATTCGCAATTGGTGGTGGAAATGGAGTTGACTGCTTTTCCGATGTGGAGATGTTTGATCTAGATGTTGAAAGATGGATTTCTGCCAGGTCAATGCTGCAAAAGAGATTTTCTCTTGCAGCAGTGGAGCTTGATGGAGCGCTTTATGCTGTTGGTGGTTTTGATGGAAAAGATTATTTGAGGTCTGCAGAACGATTCGATCCAAGAGAGCATTCCTGGAGCAGACTGGGAAGCATGAATTCACAGAGGGCCTGTCATTCCCTAATTGTCCTGAATGACAAACTGTATGCTATTGGTGGTTTTGACGGAAATGCAATGGTGCCCACTGTCGAAGTATTTGATCCGCGGTATGGGAAATGGATGATTGAGGCATCAATGAACCATGCAAGGGGATATTCAGCTGCAGCAGTATTGAGCAACACCTTGTATGTAATTGGAGGGGTGGAAGATTCTGAGAAAATTGCAGAAAAGGTCGAGCAATACCAGGAGGGTCAGGGTTGGCAACGGACAAACCTCAAGGCCATTGGCAAAAGGTGTTTTGCCGCAGCAGTAGCTTTATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_85155.p1 GENE.R_Transcript_85155~~R_Transcript_85155.p1 ORF type:complete len:661 (+),score=128.81,Kelch_1|PF01344.21|0.064,Kelch_1|PF01344.21|6.3e-12,Kelch_1|PF01344.21|1.5e-07,Kelch_1|PF01344.21|6e-13,Kelch_1|PF01344.21|1.2e-09,Kelch_1|PF01344.21|0.051,Dev_Cell_Death|PF10539.5|7.2e-53,Kelch_6|PF13964.2|2,Kelch_6|PF13964.2|3.1e-09,Kelch_6|PF13964.2|1.7e+02,Kelch_6|PF13964.2|7.9e-06,Kelch_6|PF13964.2|0.0099,Kelch_6|PF13964.2|3.2,Kelch_2|PF07646.11|17,Kelch_2|PF07646.11|0.00079,Kelch_2|PF07646.11|1.7,Kelch_2|PF07646.11|8.3e-05,Kelch_2|PF07646.11|0.0049,Kelch_2|PF07646.11|7.4,Kelch_4|PF13418.2|6.2,Kelch_4|PF13418.2|0.00046,Kelch_4|PF13418.2|15,Kelch_4|PF13418.2|0.0052,Kelch_4|PF13418.2|0.023,Kelch_4|PF13418.2|65,Kelch_3|PF13415.2|1,Kelch_3|PF13415.2|2.4,Kelch_3|PF13415.2|1.8,Kelch_3|PF13415.2|1.2e-05,Kelch_3|PF13415.2|6.1,Kelch_3|PF13415.2|2.4e+03,Kelch_5|PF13854.2|6.3e+02,Kelch_5|PF13854.2|0.31,Kelch_5|PF13854.2|83,Kelch_5|PF13854.2|96,Kelch_5|PF13854.2|0.0045,Kelch_5|PF13854.2|2.6 R_Transcript_85155:353-2335(+)
MATGKRTQKSNGSTFASSSTTASASISRNLKTSDLGGVIFGCTDSTMKECLTKQLFGLPQQHFTYVKNIRPGLTLFLFNYSRRALHGIYEAASCGQLNIDPYGWTVNGSQRTSYPAQVQIRVRKDCRPLVENQFKPVIKRNYYSHNHFSFELDHAQVSQLITLFSNQEVVVAPSYSVHRNTGNWQIVVHRQPELKHREEEGNSTSHNHSNGHLSPKDPSSCLDGVNHSIGSVIERMEKDETKRIYEKLQKLAVICEPSDSSLSNQVQESADDPKLHIEDEGSQKIKMIQDENANESPFSSDFLSVITQLVQEVQELKAFKQEQIERNSQLEEKLVKSESEVQQLRDRCTMLESFSNYSEAYTCGTIMEPCIEQHLDLEDTVLLAGGYNGQAWLSSLDCYSPSKDVIKSLRPMSSVRSYASIAKLNGDIYVIGGGNDSSWYDTVECYNFENDKWTSLPRLNGEKGSLAATTLHDKIFAIGGGNGVDCFSDVEMFDLDVERWISARSMLQKRFSLAAVELDGALYAVGGFDGKDYLRSAERFDPREHSWSRLGSMNSQRACHSLIVLNDKLYAIGGFDGNAMVPTVEVFDPRYGKWMIEASMNHARGYSAAAVLSNTLYVIGGVEDSEKIAEKVEQYQEGQGWQRTNLKAIGKRCFAAAVAL*

Click here to download the sequence:
Link to NCBI Protein BLAST