Transcript Information: R_Transcript_85400.p1


Annotated TAIR IDAT4G30200.2
Annotated Gene Namevernalization5/VIN3-like
Annotated Gene Symbol(s)VEL1, VIL2
Annotation TypeOrtholog
Chromosome Positionchr4:14786852-14790070 | Reverse length=714
E-Value3.5E-196
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 121.66591071772
Replicate 211.690460896609
Replicate 315.673030986841
Condition 2: 8 Hour
Replicate 111.225514262518
Replicate 214.122662215486
Replicate 316.291196235472
Condition 3: 24 Hour
Replicate 122.321856888986
Replicate 215.793031643253
Replicate 317.188820716718


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_85400.p1 GENE.R_Transcript_85400~~R_Transcript_85400.p1 ORF type:complete len:722 (+),score=150.70,PHD_Oberon|PF07227.7|3.4e-34,PHD_Oberon|PF07227.7|5.3e+03,PHD_Oberon|PF07227.7|9.3e+03,fn3|PF00041.17|3.5e-06 R_Transcript_85400:353-2518(+)
ATGGATTCTCCTTTTGAGGGGGCTGTGCTTGATCCTGTAAAATGTAGTAAGTTGAGTATGGAGGAGAGAAGAGAAATTGTGTATGAATTGGCCAATTGGTCACATGGTGCGGCAGAAATGCTACAATCTTGGAGCAGGCAAGACATTTTGCAAATTTTGTGTGCAGAGATGGGGAAAGAGAGGAAATATACTGGTTTGACAAAGCTGAAAATCATAGAACACCTCCTAAAAGTTGTTTCTGAAAAGAAGACAGATGACCAGAAGGGTGGGATTTTAGAACAACAACCTTCACCTTCAGCTTCTACTGCCAATAAGGCTTCGAAGAAGCCGAGGAAACCTGATCATCCTTCTCATGTTCCTGTCTTTACTCCTAATGTTTACACGTTGAATGGCGATAGTGATTCAGGCACTGTGACTTGCAAAAATGTTGCTTGTAAGGCTAGATTAAACAAGGAGGATGCATTTTGCAGGAGGTGCTCATGCTGTATATGTCACAAGTACGATGATAATAAGGATCCAAGTTTATGGCTGACCTGCAGCTCGGAGCCTCCTTTTCAGGGAGAATCATGTAACATGTCTTGTCATCTTGAGTGTGCTCTCAAACATGAAAGAGCCGGGATTGCAAAAAATGGGCTTGTGTCACAATTGGATGGGAGCTTTTACTGTGTCTCTTGCGGAAAGATGAATGATTTGATGAGATGCTGGAGGAAACAACTAATGGTTGCAAAGGATACCAGACGAGTGGACATTCTTTGTTATCGTGCCGCCCTGAGCCACAAGTTGCTGTCTGGAACAAAGAAGTACCAGGCGCTTTGTGACATTGTTGAGGAAGCAATTAAGCACCTTGAAGCAGAAGTAGGTACCTTAACTGGTATTCCTGTTAAGATGGGTAGAGGTATCGTCAACAGGCTGTCTTCAGGACAAGAAGTTCAGCGACTCTGTGCTTCTGCTGTAGCATCATATGACTCAACGATTTGTTGCACACCATTGCACGAAGATTCAAAGATGAGTACTCCGAGTATATTCAGAGTCGAAGACATTAGTGCAACGTCTGTCACTGTGATGTTGGGTCCTGACAGTACATTGGAAAACAATATAGGTTATACACTGTGGCATCAGAAGGCTGATGACAAGAAAGAAATAGCAGAGCCGACTTGTACGCTGTGTCCCCCTCAAACAAAGTTCATAGTCTCGGGACTCTCTCCAGCAACAGAATACATTTTCAAGGTTGTTTCCTCTGTTAACACAAAAGAGTTGAGCTCTTCTGTAGTCCGAGTCACAACTAGCATTTCGGCTGGTAATGATGCCAGGTGCCTGACAATGGAAAGAACTCAGAGCCCAATAACCAACTGCAGCACCCTTTCTAATCCTTCTTCTGTGGAAGACGAAACAAATAACATTGCTCCCTGCAGTGAATTGAACGAGAACAAAGACGAAAATTATTTCAATTACTACAAGATTGACAAGAAGATTGTTGATCCAAATTCATCGAGTGAGCCAGTCAACTCGACAAATGCCAGTCATGATCAAAACCCTTCTTGTGCATCAGATGAGGAGCATGCAACAGGAAAATTTGATTCTGGTGGACAACCTGATGGTGGAAAACCTGAAGTCAAACATCCGACAGACGGTCAAAATGGTGAAGCAATGAGCACTGACAATGAATCAGAAAGGAATGGTTCGTTGTTGGTGCCACGTGTGAACCTGGAAACAAGCTTGCCAATAACTCCTTGCAGGCTAGAAAGCTTGAAGGATGGGCCTGCAAAGAAGGCAGGACAAAAATCCCATAATAAGACTCAAGAGGGTGTAGGAAAGGGGAAGGAGGTGCATGCAAGAAGCTCATCCAAGAAAAGATGCTTGGAGAGCCAAGAAGAGGAGTGTGTCGGAAATTGCCCTTCAGGCGAGAGCTTGGAATACTACATAAAGGTAATTCGCTGGCTTGAATGTGAGGGTCATATTGACAAAAGCTTCAGGCAGAAATTCTTGACTTGGTATAGCATTAGGGCAACCCCTCAAGAAACAAGGATTGTCAAGGCATTTGTTGATACCCTAATTGATGACCCTGCATCTCTGTCGGAGCAACTTCTAGATACTTTTGGGGAGATAGTCTCGAGCAAGAAATCTTCTGTCGTCCCACCTGGCTTCTGCTTGAAGCTTTGGCATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_85400.p1 GENE.R_Transcript_85400~~R_Transcript_85400.p1 ORF type:complete len:722 (+),score=150.70,PHD_Oberon|PF07227.7|3.4e-34,PHD_Oberon|PF07227.7|5.3e+03,PHD_Oberon|PF07227.7|9.3e+03,fn3|PF00041.17|3.5e-06 R_Transcript_85400:353-2518(+)
MDSPFEGAVLDPVKCSKLSMEERREIVYELANWSHGAAEMLQSWSRQDILQILCAEMGKERKYTGLTKLKIIEHLLKVVSEKKTDDQKGGILEQQPSPSASTANKASKKPRKPDHPSHVPVFTPNVYTLNGDSDSGTVTCKNVACKARLNKEDAFCRRCSCCICHKYDDNKDPSLWLTCSSEPPFQGESCNMSCHLECALKHERAGIAKNGLVSQLDGSFYCVSCGKMNDLMRCWRKQLMVAKDTRRVDILCYRAALSHKLLSGTKKYQALCDIVEEAIKHLEAEVGTLTGIPVKMGRGIVNRLSSGQEVQRLCASAVASYDSTICCTPLHEDSKMSTPSIFRVEDISATSVTVMLGPDSTLENNIGYTLWHQKADDKKEIAEPTCTLCPPQTKFIVSGLSPATEYIFKVVSSVNTKELSSSVVRVTTSISAGNDARCLTMERTQSPITNCSTLSNPSSVEDETNNIAPCSELNENKDENYFNYYKIDKKIVDPNSSSEPVNSTNASHDQNPSCASDEEHATGKFDSGGQPDGGKPEVKHPTDGQNGEAMSTDNESERNGSLLVPRVNLETSLPITPCRLESLKDGPAKKAGQKSHNKTQEGVGKGKEVHARSSSKKRCLESQEEECVGNCPSGESLEYYIKVIRWLECEGHIDKSFRQKFLTWYSIRATPQETRIVKAFVDTLIDDPASLSEQLLDTFGEIVSSKKSSVVPPGFCLKLWH*

Click here to download the sequence:
Link to NCBI Protein BLAST