Transcript Information: R_Transcript_85427.p1


Annotated TAIR IDAT5G60870.1
Annotated Gene NameRegulator of chromosome condensation (RCC1) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:24485788-24487771 | Reverse length=445
E-Value4.5E-203
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.6195765379226
Replicate 23.3697766100232
Replicate 35.1375193374087
Condition 2: 8 Hour
Replicate 13.7283004240661
Replicate 23.7268136401976
Replicate 34.8180201029422
Condition 3: 24 Hour
Replicate 16.046500669025
Replicate 24.2658319664903
Replicate 35.854735821598


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_85427.p1 GENE.R_Transcript_85427~~R_Transcript_85427.p1 ORF type:complete len:486 (+),score=106.19,RCC1|PF00415.14|1.7e-05,RCC1|PF00415.14|5.4e-09,RCC1|PF00415.14|1.2e-09,RCC1|PF00415.14|2.1e-08,RCC1|PF00415.14|2.4e-11,RCC1|PF00415.14|2.4e-13,RCC1|PF00415.14|1.1e-06,RCC1_2|PF13540.2|4.9,RCC1_2|PF13540.2|51,RCC1_2|PF13540.2|7e-05,RCC1_2|PF13540.2|0.00041,RCC1_2|PF13540.2|4.1e-07,RCC1_2|PF13540.2|1.8e-11,RCC1_2|PF13540.2|5.8,RCC1_2|PF13540.2|2.6 R_Transcript_85427:58-1458(+)
ATGACAACCTTCTCCACTCTCCGCCACCACACCACCACCGTCCGTACCTTCTTCTCCTTCATCAAAAAACCCACCAACACCACCACAAAACCCTCTCACAAACCCCCATTACTCTACCAACCCAGCAACCCAAACAACACCCATCTCCACCTCCAACTTCTCTCATGGGGTCGTGGCTCATCAGGTCAACTCGGTTCCCCAACTGAGTCAACTCACCTTTACCCAACCCCAGTTTGTTCCCTTCTCTTCCCCCCTTCTTTTCAGCTCTCACCATCACAAGGCTCCATCTTGAGCCCCTCAAAACCATCAAGATCAGATTTTGAGGTGGGTATCTCATGTGGGTTGTTTCATTCTTCACTGCTTGTTAATGGGCAGTTGTGGATTTGGGGTAAAGGGGATGGTGGTAGGCTTGGTTTTGGTCATGAAAACAATGTTTTTGAACCAACTTTGAATACCCATTTGGACAATGTCAAGTCTATGGCTCTTGGTGGCCTTCATTCTGTTGCTCTTACTTCCCTTGGACAAGTCTTCACTTGGGGTTATGGTGGTTTTGGTGCTCTTGGACATTCTGTTTTTACAAGAGAACTGGTTCCTAGATTGGTTGAAGGTTCCTGGAGTGAGAAATTTAAACATATTGCAACCAGTGGAACTCACACTGCAGCTATTGCTGAATCAGGTGAACTTTACACATGGGGTCGAGAAGAAGGTGATGGGAGACTAGGTCTTGGCCCTGGACGTGGCCCTGATCAGGCAGGTGGGCTTAGCATCCCAAGCAAAGTAAAAGCTTTACCTGTTCCTGCAGCTGCTGTAGCTTGTGGTGGCTTTTTCACGTTAGCCCTAACTGAAGAAGGACAGCTTTGGAATTGGGGAGCCAATTCAAATTATGAGCTTGGAAGGGGTGATAAGATAGGCGGTTGGCAACCAAGATTGGTTTCTACTGTGGAAAATTTGCGTATGGTTCAAGTAGCTTGTGGTGGATATCATTCACTTGCTCTGACTGAGGATGGAAAGGTGCTTTCTTGGGGACACGGTGGACATGGTCAATTGGGTCATTCTTCAAATCAAAATCAGAAGGTGCCTACAGTGGTTGAGGCTTTGACTCACGAGCACGTTATCTCGATTGCCTGTGGAGGTTCATCTTCAGCAGCCGTAACTGGTTATTGTTCAGACACAGGTGACACTGCATATTTGAAAACAGAGACAGGGAAGTTATACATGTGGGGAAACGCAAAGGACTCTCAACTAGGGGTTCCTGGGCTGCCTGAGATACAGTCTTCGCCTGTTGAAGTGAACTTTCTGATGGAAGATGATGGTTTGGGGCCACCCAGTGTTCGATCTGTTGCCATTGGTGCATCTCATGCCATGTGTTTGATTTCAAGAGGTGAAGTCGCTAGGAAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_85427.p1 GENE.R_Transcript_85427~~R_Transcript_85427.p1 ORF type:complete len:486 (+),score=106.19,RCC1|PF00415.14|1.7e-05,RCC1|PF00415.14|5.4e-09,RCC1|PF00415.14|1.2e-09,RCC1|PF00415.14|2.1e-08,RCC1|PF00415.14|2.4e-11,RCC1|PF00415.14|2.4e-13,RCC1|PF00415.14|1.1e-06,RCC1_2|PF13540.2|4.9,RCC1_2|PF13540.2|51,RCC1_2|PF13540.2|7e-05,RCC1_2|PF13540.2|0.00041,RCC1_2|PF13540.2|4.1e-07,RCC1_2|PF13540.2|1.8e-11,RCC1_2|PF13540.2|5.8,RCC1_2|PF13540.2|2.6 R_Transcript_85427:58-1458(+)
MTTFSTLRHHTTTVRTFFSFIKKPTNTTTKPSHKPPLLYQPSNPNNTHLHLQLLSWGRGSSGQLGSPTESTHLYPTPVCSLLFPPSFQLSPSQGSILSPSKPSRSDFEVGISCGLFHSSLLVNGQLWIWGKGDGGRLGFGHENNVFEPTLNTHLDNVKSMALGGLHSVALTSLGQVFTWGYGGFGALGHSVFTRELVPRLVEGSWSEKFKHIATSGTHTAAIAESGELYTWGREEGDGRLGLGPGRGPDQAGGLSIPSKVKALPVPAAAVACGGFFTLALTEEGQLWNWGANSNYELGRGDKIGGWQPRLVSTVENLRMVQVACGGYHSLALTEDGKVLSWGHGGHGQLGHSSNQNQKVPTVVEALTHEHVISIACGGSSSAAVTGYCSDTGDTAYLKTETGKLYMWGNAKDSQLGVPGLPEIQSSPVEVNFLMEDDGLGPPSVRSVAIGASHAMCLISRGEVARK*

Click here to download the sequence:
Link to NCBI Protein BLAST