Transcript Information: R_Transcript_85481.p1


Annotated TAIR IDAT5G41580.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:16626563-16630659 | Reverse length=760
E-Value2.5E-125
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.9122499817975
Replicate 24.2524152741869
Replicate 35.8475005256001
Condition 2: 8 Hour
Replicate 15.5532288646178
Replicate 26.486542728192
Replicate 38.2524727609565
Condition 3: 24 Hour
Replicate 18.7423717396637
Replicate 26.7933919789542
Replicate 38.7273759194591


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_85481.p1 GENE.R_Transcript_85481~~R_Transcript_85481.p1 ORF type:complete len:948 (+),score=146.86,zf-MIZ|PF02891.16|1.1e-20 R_Transcript_85481:163-2844(+)
ATGAACGGTGCAATGGTAACTCCATCACCGTCAATGTTGAATACCATCAGCCGTGGCGGCGGTGAAGTTCGAACATTACAACCGGAATCCGCCCTTAACTCCGCTCGAGTAGGCGTTGTGGCCCAGAAAATAGCTGATTACGACAAGACATGTGGCAATACTTTTGACTCTTCATATTACTCTCAGCTCTGTATTTCTCTTGCCAGGCAGCTTGACTCAGGGTTTGATTGGCAATACAGGGGATTAGACTATGGAGTTGCAATCAACGATGTCCCTGACCAAGCTTCAACTCTGCCACCAATCTTGAAACAGGTGTGTCGCCGAAAAGATATATTCTCTGTGCGAGCAGCTATCATGGTGCTTATGATTTCAGTGAAGAATGCGTGCAAGTTGGGATGGTTCTCTGCCAAGGATAATGAAGAACTTCTAAAGCTTGCAGATGAGGTTGGTAGCTATTTTGGTGCTAACACATTACTGAACAATGAAGTAACTAGTATTCTGCCAACTGTTTCCAGCATAATGGCAAGATTCTATCCTCAGTTAAAGCTAGGTCACATAATTACAGCTCTTGAAGTTAATCCAGGATATGGGACTTATGCGGTTGATTTTCATATCTCAAAGAATATATCATATTCTGCAAGGGAAAAAATTAGATTATTCATAACTATGAAGGACAATATGGACACATCTTCTTGCATCATTAATCCCCAGCATGCGAACCTCTTGCTCAATGGAAGGGGAGTGGATCGTAGAACTAATCTCTTCATGGATCAAGGGCCTCAGCTTCCAACCATTGTCAATCAATTGCTTAAATACGGAACGAATCTGCTTCAAGCTGTCGGTCAATTTAATGGTCACTACATTATTCTCATTGCTTTCATGAGCATTGTACCGACTTCTGCCCTCCCAGCTCCGCGAGATTATGTGCAGCCTGAAACTGTTGCATCAAGTTCAGGGATAGATTCTGAGATTATTGAAGGACCATCACGTATTCGTCTCAATTGCCCTATAAGTTATCGACGCATTAGAATACCTGTGAAAGGACATTTGTGCAAGCATTATCAATGTTTCGACTTGAACAACTTTGTGGAGATCAATTCAAAACGACCATCCTGGCGGTGTCCTCATTGCAATCAATCTATCTGTTTCACTGATATACGTGTTGATCAAAATATGGTCAAGATTCTGAAGGAGGCAGGCGAAGATGTTTCAGAGGTGATGATTGATGCTGATGGTTCGTGGACAGCTGCTTCCAGCAGTAACTGTAAAGATGACTCACGAGACAAAAACCCAGCTAGCCAACAGGAAGGGCCTCATCCTCATGATTCTTCTGTTTCTGGACAGCTATTAAATGTTTCATCCAATGTGTGTGATCTCACCAAAGATGATGAAATGGACACAATAGATAGATTTGAACCTGTGGATATGAAACCTATAATCAATCAAAGCGTTCAGGCTCAATGTTTTCAAACTAACGCAACACAACCACCTACTCCCAGGTGCACCAATAATTCCCCACATCATGCAAATGGTCGTTCGACTGGATCTTTGTTGTATGATTATGGTGCTGTAAGTTATAACTTGAGATCTGAAGCTTATGACATAGGTGGCATTTCTAGGGCTCCAACAGGTAATTTCGGTTTATCTCCTGTGTTGACTGATGCTGTTACCCCTGCACTGAGTCAGCAGCCTGATAACTTCCACGGGACTAACTTTCCAACAAGTTCTACTGCACTTGGTCAATTTGCTGCTTCAAATAGTTTACAAATACAGGAGGCGCTGCTGTCAACTATGAGCAATGACCTTAACCAGACTCATATGATACCTAGAAATGTAACCAGAACTCCATCAGCTATTCAGGCCCTTCCAGTTCAGATGCCTTCACCAACTGTGCAGCAGCATTCAAGGCCTGCGATGGGCATGCCTGGTACAAGTGGGTCCTCTGCTCCTTTCCAGATGCCTGTTCAGCCCAATGCTCATATTTCTAGTACTGTTGGCAGCAACATGGAAAGGCAGCGACACCAACAGCAAGCCAGCATCAACCCTTTGATTGTGTCAAACTTGGCCATGACTTCAGTACAGAATAGATCAACTCAGGTGGCCGGTGTTCCTAGTCCTAACTTGGGTAGGATTCCACAAACATTGAGCCAGCCTCCACATTTGGCGCGGTCTTCCCGTGGTCCTATTCAGCAAGGAGTTTCCCCAAGCATGGTTGCCAACAGACCTAGCTCTGTCCAACCTGTCCAGCTTAATAGGCCAGGTGCTCAAACGAGACAGCCGCAATCAATGCCTATACAAACTCAGTCGGCCAGAGTGGCATCGTCCTTGCCTTTGACATCAGGAATCATGCCTCAGGCTGTCACAAGGACTGAAAATTTGATCGATTTGCAATCAGAGAAGAACTGGCAACCTACAGGCCGAATGCGAGGAAGCCTCCAGGGTTCAGCTCGCGATGCTGCTATGAACCAATTTATGGGTCAGCCCAATCAGCCATCCCAGGCTCCTAGCCCTAGACCGTCTGTCTCAGGAGCATCTCCATTATCAACTCATCTTCAGGCTCTGCTGTCAAATAGAATGAATTTGAATGCTCCTCGAGGGCAGAATCAACCATCGAATGATGGAGCACCTTCCTGTGGTAATGCATTTACCCAACCAGAGCAATCTCGAGGTAAATTAATTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_85481.p1 GENE.R_Transcript_85481~~R_Transcript_85481.p1 ORF type:complete len:948 (+),score=146.86,zf-MIZ|PF02891.16|1.1e-20 R_Transcript_85481:163-2844(+)
MNGAMVTPSPSMLNTISRGGGEVRTLQPESALNSARVGVVAQKIADYDKTCGNTFDSSYYSQLCISLARQLDSGFDWQYRGLDYGVAINDVPDQASTLPPILKQVCRRKDIFSVRAAIMVLMISVKNACKLGWFSAKDNEELLKLADEVGSYFGANTLLNNEVTSILPTVSSIMARFYPQLKLGHIITALEVNPGYGTYAVDFHISKNISYSAREKIRLFITMKDNMDTSSCIINPQHANLLLNGRGVDRRTNLFMDQGPQLPTIVNQLLKYGTNLLQAVGQFNGHYIILIAFMSIVPTSALPAPRDYVQPETVASSSGIDSEIIEGPSRIRLNCPISYRRIRIPVKGHLCKHYQCFDLNNFVEINSKRPSWRCPHCNQSICFTDIRVDQNMVKILKEAGEDVSEVMIDADGSWTAASSSNCKDDSRDKNPASQQEGPHPHDSSVSGQLLNVSSNVCDLTKDDEMDTIDRFEPVDMKPIINQSVQAQCFQTNATQPPTPRCTNNSPHHANGRSTGSLLYDYGAVSYNLRSEAYDIGGISRAPTGNFGLSPVLTDAVTPALSQQPDNFHGTNFPTSSTALGQFAASNSLQIQEALLSTMSNDLNQTHMIPRNVTRTPSAIQALPVQMPSPTVQQHSRPAMGMPGTSGSSAPFQMPVQPNAHISSTVGSNMERQRHQQQASINPLIVSNLAMTSVQNRSTQVAGVPSPNLGRIPQTLSQPPHLARSSRGPIQQGVSPSMVANRPSSVQPVQLNRPGAQTRQPQSMPIQTQSARVASSLPLTSGIMPQAVTRTENLIDLQSEKNWQPTGRMRGSLQGSARDAAMNQFMGQPNQPSQAPSPRPSVSGASPLSTHLQALLSNRMNLNAPRGQNQPSNDGAPSCGNAFTQPEQSRGKLI*

Click here to download the sequence:
Link to NCBI Protein BLAST