Transcript Information: R_Transcript_85518.p1


Annotated TAIR IDAT5G37350.1
Annotated Gene NameSerine/threonine-protein kinase Rio1
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:14793037-14795828 | Forward length=531
E-Value4E-76
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.0990905097927
Replicate 21.0498150208149
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.78263086444149
Replicate 31.2706127434271
Condition 3: 24 Hour
Replicate 11.2626793975237
Replicate 20.66165776671732
Replicate 30.32831557030346


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_85518.p1 GENE.R_Transcript_85518~~R_Transcript_85518.p1 ORF type:internal len:200 (+),score=37.11,RIO1|PF01163.18|1.1e-35 R_Transcript_85518:2-598(+)
TCTCCCCCAAAATTGAAAACCCTAACCCTAACCACTCAAGCAATCACATCTCCTCTCATCCTCTCACCGGAGACTCGCCGGATTCTCGCCGGAGAATCGCCGACAGAGGTTGAAGGCGGCAGGAATACGTTGTCCCACTCCTATTCTTCTAAGACTTCATGTTTTGGTTATGGAATTCGTAGGAAGGCAGGTTGGGCAGCAGATCGGCTTAAAGATGCAGCTTTGTCCCTTGACAAGCTGCGAGAGTGTTATGTAGAGATTATTACGGCGATGCGAACATTGTATCAGAAGTGCAAACTAGTACATGGAGACCTGAGTGAGTACAACATACTGTATTATGAGGGTCACTTGTATATAATTGATGTGTCACAAGCTGTTGATCTTGACCATCCACATGCACTTGATTTCTTACGTGAGGACTGTGTTCATGTTTCGGATTTCTTTAGAAAACACGGTGTGGCTGTGATGACTATCCGAGAACTTTTTGATTTCATAGTGGATCCAACCATTGCTGATGATGCTGTGGATACTTACTTGGACGAGATCCAACAAAGGATCCAAGCAAGAGGGGATGTTGTATCTGCTGAGGAGCAAATA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_85518.p1 GENE.R_Transcript_85518~~R_Transcript_85518.p1 ORF type:internal len:200 (+),score=37.11,RIO1|PF01163.18|1.1e-35 R_Transcript_85518:2-598(+)
SPPKLKTLTLTTQAITSPLILSPETRRILAGESPTEVEGGRNTLSHSYSSKTSCFGYGIRRKAGWAADRLKDAALSLDKLRECYVEIITAMRTLYQKCKLVHGDLSEYNILYYEGHLYIIDVSQAVDLDHPHALDFLREDCVHVSDFFRKHGVAVMTIRELFDFIVDPTIADDAVDTYLDEIQQRIQARGDVVSAEEQI

Click here to download the sequence:
Link to NCBI Protein BLAST