Transcript Information: R_Transcript_85543.p1


Annotated TAIR IDAT3G43920.2
Annotated Gene Namedicer-like 3
Annotated Gene Symbol(s)DCL3, ATDCL3
Annotation TypeOrtholog
Chromosome Positionchr3:15753548-15760830 | Forward length=1580
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.6870981128532
Replicate 22.4145745478743
Replicate 32.405207447596
Condition 2: 8 Hour
Replicate 12.5220440895663
Replicate 22.0572011293891
Replicate 33.6666253453182
Condition 3: 24 Hour
Replicate 12.9615571323738
Replicate 23.0877362446808
Replicate 33.3707065217822


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_85543.p1 GENE.R_Transcript_85543~~R_Transcript_85543.p1 ORF type:complete len:1000 (+),score=172.57,Ribonuclease_3|PF00636.22|1.6e-25,Ribonuclease_3|PF00636.22|4.7e-18,Ribonucleas_3_3|PF14622.2|6.1e-07,Ribonucleas_3_3|PF14622.2|1.9,Ribonucleas_3_3|PF14622.2|1.2e-12,PAZ|PF02170.18|4.3e-16 R_Transcript_85543:346-3345(+)
ATGAATATTCTGGACGATCGTCATGTTCCAGATAATGAAGGGCATAATGAAAGTGATTTGAAAGCCAAAAGCAATGATTTAGCTGGTGCTGGGGGCACAAAAAGAAAGGAGCTACATGGTACAACTCATGTGCGGGCACTCTCTGGTTCTTGGAGAGACAATCCTCAGGGTTCTGTATTCCATGTTTACAAGATAGATTTCACATGCAATACTGATAGCGAGCTGTATTCAGGATTTGTTCTTTTGACAGAGTCAAAGCTAGATAATGATGTTGCAAATGCAAAAGTGGACTTGTATTTGCTTGATAGGATGGTGAATTCATCTGTTATCTCATGTGGGGAACTATATATGAATTCAGATGAAATCAGGCGAGCAATGGCCTTTCATGAGCTTCTCTTTAATGGGTTATTTGGAAAATTATTTAAAGGATCAAAAGCAAGAGGTACACAAAGAGAATTTCTTCTGCAGAGAGACAATAATATTTTGTGGAGTCCGTCCTACATGTATCTGATCTTACCGCTCGAGTCACCAAACATTGTTGATCGTGATACTTTGAGAATCAAGTGGAAGGCAATTGACTCCTGTGTAGCTGTGATAGAATTTATGAACAATAATGCTTGGTTAAGTCCTGAGCTTTCGGGAAACTTGAATCAGAGTCTAACTGGTGGCACCTCCTCAGCAGGTGAAAATTGCACTAACATGGGCACTCTACGTCTGGCGAATAGTTCATTTTCTGTTGGTGAGCTAAGAGACACTGTTGTGATGGCCATTCACACCGGCAGGATATATTATGTTCTTGATGTCTTGCATGATACATCTGCTGCGAGCCCTTTTGACGGAAATGGAGATGGGGCACCATTGAAATATTCCAGTTTTGCTGATTACTTTAACAAAAAGTATGGCATTGTCCTATCTTACACAGGACAGCCATTATTGCTGCTGAAGCAAACTCATAATCCATTCAACCTTCTTGTAGACAATGAAGTTGGTGCGTCACGCCGAAAGCTGATATCAAATGGCAGTAAAGTATCTGCTGATAAGCCGCAGAATCATGTTCACATGCCTCCTGAACTATTAGTCAGTATCGATGTTCCACTCTCAGTTCTAAGAGCATTTTATTTGATACCTTCATTGATGCACCGGATGGAGACTCTGATGTTGGCCTGCCAGCTAAGAGAAGATATTGCCTTTAATTTAGGCAACTTTCATATGCCAAGCTCACTGATTTTGGAAGCACTTACAACCCTTAGATGCTGTGAGGAATTTTCTTCAGAGCGTTTGGAGCTGCTTGGGGATTCAGTGCTTAAGTATGCAGTGAGCTGCCATGTCTTTCTTAAATATCCCCAGAAACATGAAGGGCAACTATCTGGTCACCGCCAGAGGGTTATTTGCAATGCTACCTTACATGAATTGGGAATTAAACGCAGGTTACAGGAATACATACGTGATAGTCCATTCGAGCCCCGTCGTTGGGTTGCCCCTGGGCAGCTTTCTGTCCACCCCGTTCCTTGTTCTCATGATATTGACACATCTGAAGTGCCTGTTGATAGCAGATACCAAACCTATGATGAGACTGTCATACTTGGAAAGAACTGTGACAGAGGACACAGGTGGATGGTTTCTAAAAGCATATCTGATTGTGTTGAGGCACTTATTGGGGCATACTATGTTGGTGGTGGATTAGTGGCTGCACTCCATATGATGAGGTGGGTGGGGATTAAAGCTGAACTAGAGCTGGATTTTGTTGACAAGGTTATTAATTCGGCATCAGAGCGATCTTACACCCAAAAAGTTGATGAGATAAAAACCCTAGAGTCTAAGCTTGGCTATGAATTTTCTTTTAAGGGACTATTACTTGAAGCTATTACCTATGCAAACGAAAAAGAAGAGGTGGGATATTCTTACGAGAGACTGGAGTTCCTTGGGGATGCTGTGTTGGATGTACTTATAACATGGTATCTTTACCGGAACCACATTGATATTGATCCAGGAGAGTTGACCGACCTGCGTTCAGCTTCTGTCAACAATGAAACTTTTGCTCAAGTTGCTGTTAGGCGAAACCTGTATCAGCATCTTCTGAACTGTTCTGGATTACTATCAGAACAGATAACAGCGTATGTGACATTGGTTGTCAATTCAGAAGACGCTAAAACACTGCAAGGAAGACAATTTCCAAAGGCTCTAGGTGATCTCGTTGAGAGTATTGCTGGGGCAATACTGATCGATACTATGCTTAATGTTGAGGAAGTCTGGAGAATCTTTGAACCATTACTGTCACCCATTGTGACCCCTGAAAATCTTGAGTTGCCTCCTTTTCGTGAACTGAATGAATTGTGTGATAGTCATGGGTACTTTTTCAAAGAAGATTGTGTCAATGATAAAGGTTTGGTGCTTGCAGAGCTTAGATTGCAACTGAAAGACATCCTCTTGATAGGAGAAGGGGTTGGAAAAACCAGAAAAGCAGCCAAGGGACTAGCAGCCCTTCATCTGTTAAAGGTTCTGGAGTATAAAGGAGTTTCAAAGAGAAAGGGGGGATCTTTGCATGTTGCTTCTGACCTGATAGATGTCAATTGCAGTCTAGTAGATGACAATAATATAATGGAACACGTATCTTACAAAAAACAAAAGATATCTCAATTGCATCCTGGGCACAATCTGGATGCCAGTAATGGGACTCCAGTTATTTCAGCAGTTAACACAAACAAAGGAGGACCGAGAACCTCCCTCTATGAACTTTGTAAACGATTGCAGTGGCCAATGCCCAGCTTCGAAGTAGCAGAAAATAAGTCTAGATCTCCTATTGAATTTGGCAAAGGTTCCAACAAAAGGCAAAGCTTCAATAGTTTTGTGTCAAAAATTTCCCTGCACATACCTGACTTTGGTGTTGTAGAGGTCGAGGGAGAGCATAGAGCTGATAAGAAAAGTTCTCACGATTCTGCAGCACTATGCCTGCTTTACAGGCTGGAAGAGCTGGGAAAGCTTGTAATTGGGTGTTCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_85543.p1 GENE.R_Transcript_85543~~R_Transcript_85543.p1 ORF type:complete len:1000 (+),score=172.57,Ribonuclease_3|PF00636.22|1.6e-25,Ribonuclease_3|PF00636.22|4.7e-18,Ribonucleas_3_3|PF14622.2|6.1e-07,Ribonucleas_3_3|PF14622.2|1.9,Ribonucleas_3_3|PF14622.2|1.2e-12,PAZ|PF02170.18|4.3e-16 R_Transcript_85543:346-3345(+)
MNILDDRHVPDNEGHNESDLKAKSNDLAGAGGTKRKELHGTTHVRALSGSWRDNPQGSVFHVYKIDFTCNTDSELYSGFVLLTESKLDNDVANAKVDLYLLDRMVNSSVISCGELYMNSDEIRRAMAFHELLFNGLFGKLFKGSKARGTQREFLLQRDNNILWSPSYMYLILPLESPNIVDRDTLRIKWKAIDSCVAVIEFMNNNAWLSPELSGNLNQSLTGGTSSAGENCTNMGTLRLANSSFSVGELRDTVVMAIHTGRIYYVLDVLHDTSAASPFDGNGDGAPLKYSSFADYFNKKYGIVLSYTGQPLLLLKQTHNPFNLLVDNEVGASRRKLISNGSKVSADKPQNHVHMPPELLVSIDVPLSVLRAFYLIPSLMHRMETLMLACQLREDIAFNLGNFHMPSSLILEALTTLRCCEEFSSERLELLGDSVLKYAVSCHVFLKYPQKHEGQLSGHRQRVICNATLHELGIKRRLQEYIRDSPFEPRRWVAPGQLSVHPVPCSHDIDTSEVPVDSRYQTYDETVILGKNCDRGHRWMVSKSISDCVEALIGAYYVGGGLVAALHMMRWVGIKAELELDFVDKVINSASERSYTQKVDEIKTLESKLGYEFSFKGLLLEAITYANEKEEVGYSYERLEFLGDAVLDVLITWYLYRNHIDIDPGELTDLRSASVNNETFAQVAVRRNLYQHLLNCSGLLSEQITAYVTLVVNSEDAKTLQGRQFPKALGDLVESIAGAILIDTMLNVEEVWRIFEPLLSPIVTPENLELPPFRELNELCDSHGYFFKEDCVNDKGLVLAELRLQLKDILLIGEGVGKTRKAAKGLAALHLLKVLEYKGVSKRKGGSLHVASDLIDVNCSLVDDNNIMEHVSYKKQKISQLHPGHNLDASNGTPVISAVNTNKGGPRTSLYELCKRLQWPMPSFEVAENKSRSPIEFGKGSNKRQSFNSFVSKISLHIPDFGVVEVEGEHRADKKSSHDSAALCLLYRLEELGKLVIGCS*

Click here to download the sequence:
Link to NCBI Protein BLAST